DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and LOC100485272

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_002936261.2 Gene:LOC100485272 / 100485272 XenbaseID:XB-GENE-29077723 Length:502 Species:Xenopus tropicalis


Alignment Length:334 Identity:96/334 - (28%)
Similarity:158/334 - (47%) Gaps:53/334 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SQMLQLDALVMAMACLSTTQTDLGGGLLVPPSLGNASSSSCPVSALSGLTTRMQSLNNEIASVKE 66
            |:.||:|.::       :.|.:|.|      .||         ..||..|.....|..:..::.|
 Frog   218 SEKLQVDDVL-------SRQNELIG------ELG---------QQLSEATVNNSMLQRQQIAIME 260

  Fly    67 QIGSLQEQLVDLRRAGSAPVVGLASPNALASRFPFSHNSLDIEPQLLANGGAAAVPITPANCLKQ 131
            .:|    ||:::....:..:..:...:.:..|     :..|:....|.:.|...:..:.|.    
 Frog   261 TVG----QLINMVSQYNPDIPVIPKEDQMTFR-----DCADVYKSGLTSSGVYTLHFSNAT---- 312

  Fly   132 QHGVVRIRPRSNVEPFFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTTEFFIGLD 196
                      |.|:   |.|:..:..||||::.:|.|||.||:|.|.:|:.|||..:.|:::|.:
 Frog   313 ----------STVK---VLCEMDISGGGWTIIQHRKDGSVDFHRLWKEYREGFGSPSGEYWLGNE 364

  Fly   197 KLHQITSSDNYELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAA-DALRDHTGKK 260
            .:||:|:..:|.|.:||::......|:||||||:|:|.::|||.|.| |.|.|. .:....||.:
 Frog   365 FVHQLTAHGSYALRIQLRDWDGNEAYSLYDHFSLGTEEQKYRLQVRG-YSGTAGRTSSFSPTGTE 428

  Fly   261 FSTHDRVNDENEQNCAAQQSGAFWYGGSCNLTNPFGLYQRLLERDVDGFKGILWRGFLNGPKGSL 325
            |||.|..||.....||...:|.:|: .:|..:|..|:|.: ..:....|.|:.|. :..||...|
 Frog   429 FSTKDVDNDRCSCRCAQMATGGWWF-DACGPSNLNGIYYQ-GGQSTAKFNGLKWH-YWKGPTHGL 490

  Fly   326 KIVRMMVRP 334
            |.|.||:||
 Frog   491 KSVSMMIRP 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 75/213 (35%)
LOC100485272XP_002936261.2 FReD 286..499 CDD:238040 77/238 (32%)

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