DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and LOC100334800

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001315009.1 Gene:LOC100334800 / 100334800 -ID:- Length:246 Species:Danio rerio


Alignment Length:239 Identity:75/239 - (31%)
Similarity:117/239 - (48%) Gaps:28/239 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 AVPITPANCLKQQHGVVRIRP-----------RS-------------NVEPFFVFCDQKVRNGGW 160
            |..::.|:..:..|...|.||           ||             ||:...:...::..:|||
Zfish     8 AALLSVASAFRDSHPDYRSRPCDCSDLHRSGERSSRTHTVYIDDSPINVDCHMISEGREDEHGGW 72

  Fly   161 TMVVNRYDGSEDFNRKWADYKIGFGPLTTEFFIGLDKLHQITSSDNYELLVQLQNRKQELRYALY 225
            |::..|.|||.:|.|.|.:||.|||....|.::||:.:|:||.:..|.|.|.:::.......|.|
Zfish    73 TVIQKRMDGSLNFYRPWKEYKRGFGTPEGEHWLGLENIHRITRNKKYMLRVDIEDFGGRKGCAHY 137

  Fly   226 DHFSIGSESEQYRLNVLGDYHGDAADALRDHTGKKFSTHDRVNDENEQNCAAQQSGAFWYGGSCN 290
            ..||:..|.:.|:|:|.|...|.|.|:|..|..:||||.|:..|:.::|||.:..|.||| ..|:
Zfish   138 SSFSVDCEEDGYKLHVSGFRDGGAGDSLSSHNNQKFSTFDKDQDDYKKNCAREFLGGFWY-KKCH 201

  Fly   291 LTNPFGLYQRLLERDVDGFK-GILWRGFLNGPKGSLKIVRMMVR 333
            ..||.|:|  |...|...:. |:.|..:.:....|||.:.|.::
Zfish   202 HANPNGVY--LWGHDRTHYAIGVCWWSWDHNYYNSLKYISMKIK 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 74/236 (31%)
LOC100334800NP_001315009.1 FReD 28..245 CDD:238040 70/219 (32%)

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