DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and tnca

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_068077498.1 Gene:tnca / 100149028 ZFINID:ZDB-GENE-130530-849 Length:2336 Species:Danio rerio


Alignment Length:336 Identity:97/336 - (28%)
Similarity:145/336 - (43%) Gaps:51/336 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TTQTDLGGGLLVPPSLGNASSSSC------PVSALSGLTTRMQSLNNEIASVKEQIGSLQEQLVD 77
            ||..|....|:.    .|..:.|.      |.:|::|.|...|:.:.::..|..........|.:
Zfish  2019 TTDVDAPRDLVA----SNIQTDSAVLSWTPPRAAITGYTLTFQNSDADVREVIVDPSVASHTLSN 2079

  Fly    78 LRRAGSAPVVGLASPNALASRFPFSHNSLDIE--------------PQLLANGGAAAVPITPANC 128
            ||......|:..|......||      |:..|              .:.|.||..::.|.|    
Zfish  2080 LRSTTKYTVILQAVSEDKRSR------SISTEFTTVGMLYGHPRDCSEALLNGETSSGPYT---- 2134

  Fly   129 LKQQHGVVRIRPRSNVEPFFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTTEFFI 193
                   :.|. ....:|..|:||.....|||.:.:.|..|..:|.|.|.:|..|||..:.||::
Zfish  2135 -------IYIN-GDEKQPLRVYCDMTTDGGGWMLFLRRQSGKLNFYRNWRNYSAGFGDTSDEFWL 2191

  Fly   194 GLDKLHQITSSDNYELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAADALRDHTG 258
            ||..||:||::..||:.|.|::..:.: :|:||.|.||....:|::.: |.|.|.|.|:|..|..
Zfish  2192 GLSNLHKITAAKQYEIRVDLRDGSETV-FAVYDRFYIGDPRSRYKIQI-GAYSGTAGDSLTYHQN 2254

  Fly   259 KKFSTHDRVNDENEQNCAAQQSGAFWYGGSCNLTNPFGLYQRLLERDVDGFKGILWRGFLNGPKG 323
            :.|||:|..||....|||....||||| .:|:..|..|.|     .|....|||.|..: .|.:.
Zfish  2255 RPFSTYDSDNDIAITNCALSYKGAFWY-KNCHRVNLMGKY-----GDSSHSKGINWFHW-KGHEH 2312

  Fly   324 SLKIVRMMVRP 334
            |:....|.:||
Zfish  2313 SIPFAEMKIRP 2323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 72/212 (34%)
tncaXP_068077498.1 EGF_Tenascin 191..218 CDD:480934
EGF_Tenascin 253..280 CDD:480934
EGF_Tenascin 315..342 CDD:480934
EGF_Tenascin 377..404 CDD:480934
EGF_Tenascin 408..434 CDD:480934
EGF_Tenascin 439..466 CDD:480934
C_rich_MXAN6577 449..578 CDD:469225
EGF_Tenascin 470..497 CDD:480934
FN3 593..679 CDD:238020
fn3 682..763 CDD:394996
FN3 742..1122 CDD:442628
FN3 1087..1171 CDD:238020
fn3 1210..1289 CDD:394996
fn3 1301..1376 CDD:394996
fn3 1392..1464 CDD:394996
FN3 1486..1570 CDD:238020
fn3 1574..1649 CDD:394996
fn3 1665..1740 CDD:394996
fn3 1756..1829 CDD:394996
fn3 1846..1925 CDD:394996
fn3 1935..2013 CDD:394996
fn3 2023..2096 CDD:394996 15/76 (20%)
FReD 2114..2323 CDD:238040 74/229 (32%)
Blue background indicates that the domain is not in the aligned region.

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