DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1889 and tnr

DIOPT Version :10

Sequence 1:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001107287.1 Gene:tnr / 100135076 XenbaseID:XB-GENE-948286 Length:1350 Species:Xenopus tropicalis


Alignment Length:341 Identity:106/341 - (31%)
Similarity:159/341 - (46%) Gaps:53/341 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 QTDLGGGL----LVPPSLGNASSSSCPVSALSGLTTRMQSLNNEIASVKEQIGSLQEQLVD---- 77
            ||....|:    ::.|.:...::.....|||......:..:.|.|.:.|....|.:|.:||    
 Frog  1023 QTSRSVGVSFTTILDPPMNLTATEVARTSALISWQPPISPIENYILTYKSANESRKELIVDAEDT 1087

  Fly    78 -LRRAGSAPVVGLASPNALASRFPFSHNSLDIEPQLLANGGAAAVPIT-----------PANCLK 130
             :|..|            |.....::.:.|.::     ||..::|..|           |.:|.:
 Frog  1088 WIRLEG------------LLESTEYTVSILSVQ-----NGERSSVTHTVFTTGGRVFSYPQDCAQ 1135

  Fly   131 ------QQHGVVRIRPRSNV-EPFFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFGPLT 188
                  .|.||..|....:: :...|:||.....|||.:...|.:|..||.||||||::|||.|.
 Frog  1136 HMLNGDNQSGVYYIYINGDMSQSVPVYCDMATDAGGWIVFQRRQNGLTDFFRKWADYRVGFGNLE 1200

  Fly   189 TEFFIGLDKLHQITSSDNYELLVQLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAADAL 253
            .||::|||.|||:||...|||.:.::: .||..||.|:.|:||.....|:|.: ||::|.:.|:|
 Frog  1201 DEFWLGLDTLHQVTSQGRYELRIDMRD-GQEAVYAYYNKFNIGDARSLYKLRI-GDFNGTSGDSL 1263

  Fly   254 RDHTGKKFSTHDRVNDENEQNCAAQQSGAFWYGGSCNLTNPFGLYQRLLERDVDGFKGILWRGFL 318
            ..|.|:.|||.||.||....|||:...||:|| .:|:.||..|.|..  .|...|.....|:|. 
 Frog  1264 TYHQGRPFSTKDRDNDVAVTNCASSYKGAWWY-KNCHRTNLNGKYGE--SRHSQGINWYHWKGH- 1324

  Fly   319 NGPKGSLKIVRMMVRP 334
               :.|:..|.|.:||
 Frog  1325 ---EFSIPFVEMKMRP 1337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1889NP_727376.2 FReD 123..335 CDD:238040 85/230 (37%)
tnrNP_001107287.1 EGF_alliinase 153..196 CDD:398501
C_rich_MXAN6577 179..305 CDD:469225
EGF_Tenascin 197..224 CDD:480934
FN3 321..410 CDD:238020
fn3 413..493 CDD:394996
fn3 504..582 CDD:394996
FN3 <563..>753 CDD:442628
fn3 773..845 CDD:394996
fn3 862..939 CDD:394996
fn3 949..1018 CDD:394996
FN3 1037..1122 CDD:238020 19/101 (19%)
FReD 1129..1337 CDD:238040 82/216 (38%)
Blue background indicates that the domain is not in the aligned region.

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