DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1791 and fibcd1a

DIOPT Version :9

Sequence 1:NP_572591.1 Gene:CG1791 / 31927 FlyBaseID:FBgn0030163 Length:334 Species:Drosophila melanogaster
Sequence 2:XP_005166963.1 Gene:fibcd1a / 100151577 ZFINID:ZDB-GENE-081105-148 Length:464 Species:Danio rerio


Alignment Length:380 Identity:124/380 - (32%)
Similarity:172/380 - (45%) Gaps:69/380 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALEALVTALACLSTTTNATSNLPGKHFSVIMRNSAEPFLLAENDTASCPVSTLAGLAARVQF-- 63
            :.||.:.|:|  |.:.|:..::|.    ||..::.|....|||.      |:.|:..|::::.  
Zfish   106 LRLEGVQTSL--LHSLTDHDTDLK----SVKGQDRALLVKLAEE------VAKLSAHASQLKMEY 158

  Fly    64 ---------MTDELQNLKTELNELQGLIEE-------------------YKNQGTGIPIATRLLR 100
                     :..||..|:||...|..|:.|                   .|..|.   |.:||..
Zfish   159 NALRQGQGNIGQELSTLQTEQGRLIQLLSESQINMVKVVNSVSDALSSMQKENGN---IKSRLKA 220

  Fly   101 PLP-ASVQTF-PLALATPPDDTPRNCYD-EKHGQVR---IRIAPDMEP--FFASCDQKVRDGGWM 157
            .|. |.|::. |...|......||:|.| ...||..   ..:.|...|  |...||.....|||.
Zfish   221 DLQRAPVRSVRPKGCAAGEGSRPRDCSDIYASGQREDGIYSVFPTHYPAGFQVFCDMTTDGGGWT 285

  Fly   158 VIAYRFDGSEDFNKDWQNYKAGFGALNSEFFIGLDKLHRLTNSEHHELLIIMKKKSGEERFALYD 222
            ||..|.|||.:|.:||:.|:.|||.:..|.::|:.::|.||...::||.|.::.......||.|.
Zfish   286 VIQRREDGSVNFFRDWEAYREGFGKITGEHWLGMKRIHALTIQANYELRIDLEDFENSTSFAQYG 350

  Fly   223 HFSIG-----SESEKYLLYVLGAYKGDAGDSLRYHAGKKFTTFDQDNDDNGQNCARTHAGAWWYG 282
            .|.:|     .:.:.|.|.: ..|.|.|||||..|.|.||||.|:|||.:..|||..:.||||| 
Zfish   351 SFGVGLFSVDPDEDGYPLSI-ADYSGTAGDSLLKHNGMKFTTKDKDNDHSENNCASFYHGAWWY- 413

  Fly   283 RECFESNLFGTFQSKYGQEIGYFKGILWKSFLPGPTG---SLSYVRMLIRPLKKQ 334
            |.|..|||.|  |...||...|..||.|.|:    ||   ||.:..|.|||.|::
Zfish   414 RNCHTSNLNG--QYLRGQHTSYADGIEWSSW----TGWQYSLKFTEMKIRPTKEE 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1791NP_572591.1 FReD 119..331 CDD:238040 88/225 (39%)
fibcd1aXP_005166963.1 FReD 243..458 CDD:238040 87/222 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000029
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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