DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf4 and XB5763442

DIOPT Version :9

Sequence 1:NP_001285068.1 Gene:Idgf4 / 31926 FlyBaseID:FBgn0026415 Length:442 Species:Drosophila melanogaster
Sequence 2:XP_031751817.1 Gene:XB5763442 / 548945 XenbaseID:XB-GENE-5763443 Length:486 Species:Xenopus tropicalis


Alignment Length:464 Identity:122/464 - (26%)
Similarity:195/464 - (42%) Gaps:110/464 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVGSLAIGQISAAGSHHLLCYYDGNSFVREGLSKLILTDLEPALQYCTHLVYGYAGINPSSNKL 73
            |.:|...:..:....|..|:||:...:....|:::.:..|::|.:  ||||:|.:|.:..:...:
 Frog     6 LFLGITLLLHVQLGSSFKLVCYFTNWAQYYPGVAQYMPDDVDPCM--CTHLIYAFATMTNNEIAI 68

  Fly    74 VSNNEKLDLDLGSSLFRQVTGLKRKYPALKVLLSVGGDKDTVDPENNKYLTLLESSNARIPFINS 138
            ...|:       .:.:.....||.....||.||||||........||    ::.|...|..||||
 Frog    69 FEPND-------PAFYASFNALKNYNSELKTLLSVGGWNYGTSGFNN----MVSSPQNRQTFINS 122

  Fly   139 AHSLVKTYGFDGLDLGWQFPKNKPKKVHGSIGKFWKGFKKIFSGDHVVDEKAEEHKEAFTALVRE 203
            ..:.::.|||||||:.|::|.:..:   ||                     ..|.||.::.|::|
 Frog   123 VITFLRKYGFDGLDIDWEYPGDSDR---GS---------------------PPETKEQYSILLQE 163

  Fly   204 LKNAFRPDG-------YILGLSV---LPNVNSSLFFDVPAIINNLDYVNLHTYD----------- 247
            :.|||..:.       .::..:|   :|.:.:.  :.:|.:...||.:|:.|||           
 Frog   164 MYNAFVQEASQSNLPRLLISAAVSAGMPTIEAG--YQIPQLSQYLDLINVMTYDLRGSWEGFTGE 226

  Fly   248 ----FQTPERNNEVADFPAPIYELNERNPEFNVNYQVKYWTGNRAPAAKINVGIATYGRAWKLTK 308
                :|.|      ||....||        |||:|.:.||..|.|...|:.||...|||.:.|: 
 Frog   227 DSPLYQGP------ADQGGYIY--------FNVDYAMNYWKNNGAAPEKLMVGFPAYGRTFTLS- 276

  Fly   309 DSGLTGLPPVAEADGVAPAGTQTQIPGLLSWPEVCAKLPNPANQHLKGADGPLRKVGDPTKRFGS 373
            |....||.  |...|..||...||..|.:::.|:|..|...|                 |..:.|
 Frog   277 DPSNNGLG--APTSGGGPAAPYTQESGFMAYFEICNFLKQGA-----------------TVVWNS 322

  Fly   374 -----YAYRSADDSGENGVWVGYEDPDTAAIKAEYVKREGLGGIAVVDLSFDDFRGGCTGHDKFP 433
                 |||:.::       |:||::..:..||||::.:...||..|..|..|||.|...|...:|
 Frog   323 PQAVPYAYKGSE-------WIGYDNEKSFQIKAEWLMKNNFGGAMVWALPLDDFSGHFCGQGNYP 380

  Fly   434 ILRQVKSKL 442
            ::..:||.|
 Frog   381 LMNTLKSTL 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf4NP_001285068.1 GH18_IDGF 26..442 CDD:119352 118/445 (27%)
Glyco_18 27..420 CDD:214753 110/422 (26%)
XB5763442XP_031751817.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.