DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf4 and Cht5

DIOPT Version :9

Sequence 1:NP_001285068.1 Gene:Idgf4 / 31926 FlyBaseID:FBgn0026415 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_650314.1 Gene:Cht5 / 41687 FlyBaseID:FBgn0038180 Length:595 Species:Drosophila melanogaster


Alignment Length:433 Identity:118/433 - (27%)
Similarity:191/433 - (44%) Gaps:70/433 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVGSLA---IGQISAAGSHHLLCYYDGNSFVREGLSKLILTDLEPALQYCTHLVYGYAGINPSS 70
            ||:|.|.   ...:::..:..::||:...:..|.|:.:..|.|: || ..|||::|.:.|:|..|
  Fly     8 LLLGVLCSWPAATVASDQASRIVCYFSNWAVYRTGIGRYGLEDV-PA-DLCTHIIYSFIGVNDKS 70

  Fly    71 NKLVSNNEKLDLDLGSSLFRQVTGLKRKYPALKVLLSVGGDKDTVDPENNKYLTLLESSNARIPF 135
            ..::..:.:||:|.|.  |.:.|.||:..|.:|:.::|||..:    ..:||..::...:.|..|
  Fly    71 WDVLVIDPELDVDQGG--FSKFTQLKKSNPNVKLEIAVGGWAE----GGSKYSQMVAVRDRRQSF 129

  Fly   136 INSAHSLVKTYGFDGLDLGWQFPKNKPKKVHGSIGKFWKGFKKIFSGDHVVDEKAEEHKEAFTAL 200
            |.|....:|.|.|||.||.|::|        |:..:          |.:..|      |:.|...
  Fly   130 IRSVVRFMKQYNFDGFDLDWEYP--------GATDR----------GGNYGD------KDKFLYF 170

  Fly   201 VRELKNAFRPDGYILGLSVLPNVNSSLF-----FDVPAIINNLDYVNLHTYDFQTPERNN--EVA 258
            |.||:.||..:|  .|..:...|..:.|     :.||.:...||.::..|||.    |.|  ..|
  Fly   171 VEELRRAFDREG--RGWEITMAVPVAKFRLNEGYHVPELCEALDAIHAMTYDL----RGNWAGFA 229

  Fly   259 DFPAPIYELNERN---PEFNVNYQVKYWTGNRAPAAKINVGIATYGRAWKLTKDSGLTGLPPV-- 318
            |..:|:|:.....   .:.|||..:..|.....||.|:.||:..|||.:.|:..:....:...  
  Fly   230 DVHSPLYKRKHDQYAYEKLNVNDGLALWEEMGCPANKLVVGVPFYGRTFTLSNSNKNYNMGTYIN 294

  Fly   319 AEADGVAPAGTQTQIPGLLSWPEVCAKLPNPANQHLKGADGPLRKVGDPTKRFGSYAYRSADDSG 383
            .||.|.|| |..|...|.|::.|:|.::.:.:    ||........|     ...|.|:...   
  Fly   295 KEAGGGAP-GPYTNASGFLAYYEICTEVMDKS----KGWTVEWDDAG-----MVPYTYKDTQ--- 346

  Fly   384 ENGVWVGYEDPDTAAIKAEYVKREGLGGIAVVDLSFDDFRGGC 426
                |||||:..:..||.:::|:.|..|.....:..|||.|.|
  Fly   347 ----WVGYENEASIQIKMDFIKQRGYAGAMTWAIDMDDFHGMC 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf4NP_001285068.1 GH18_IDGF 26..442 CDD:119352 114/413 (28%)
Glyco_18 27..420 CDD:214753 109/404 (27%)
Cht5NP_650314.1 Glyco_18 28..379 CDD:214753 109/405 (27%)
GH18_chitolectin_chitotriosidase 29..397 CDD:119351 114/412 (28%)
Trypan_PARP 367..469 CDD:114603 7/19 (37%)
CBM_14 531..578 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 115 1.000 Inparanoid score I1336
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
54.960

Return to query results.
Submit another query.