DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf4 and chia.3

DIOPT Version :9

Sequence 1:NP_001285068.1 Gene:Idgf4 / 31926 FlyBaseID:FBgn0026415 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_998378.1 Gene:chia.3 / 406819 ZFINID:ZDB-GENE-040426-2891 Length:471 Species:Danio rerio


Alignment Length:449 Identity:127/449 - (28%)
Similarity:199/449 - (44%) Gaps:85/449 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LVGSLAIGQISAAGSHHLLCYYDGNSFVREGLSKLILTDLEPALQYCTHLVYGYAGINPSSNKLV 74
            |:..|::.....|.|..:.||:...|..|.|:.|....:::|.|  ||||:|.::.|| ..|:||
Zfish     6 LIAGLSLVLCHVAFSMEMACYFTNWSQYRPGIGKYTPANVDPYL--CTHLIYAFSIIN-QRNELV 67

  Fly    75 S---NNEKLDLDLGSSLFRQVTGLKRKYPALKVLLSVGGDKDTVDPENNKYLTLLESSNA-RIPF 135
            :   |:|        :|::....||.|.|.||.||:|||..     ..:...:::.|:.| |..|
Zfish    68 TYEWNDE--------TLYKAFNELKNKNPTLKTLLAVGGWN-----FGSAQFSIMVSNPANRKTF 119

  Fly   136 INSAHSLVKTYGFDGLDLGWQFPKNKPKKVHGSIGKFWKGFKKIFSGDHVVDEKAEEHKEAFTAL 200
            |.|....::|:|||||||.|::|        |:.|                  ...|.|:.||.|
Zfish   120 IQSTIKFLRTHGFDGLDLDWEYP--------GARG------------------SPPEDKQRFTLL 158

  Fly   201 VRELKNAFRPDGYILG-----LSVLPNVNSSLF---FDVPAIINNLDYVNLHTYDFQ-TPERNNE 256
            .:||..|:..:....|     |:...:......   :::..|...|:::|:.||||. |.||   
Zfish   159 CKELVAAYEAESKATGNPQLMLTAAVSAGKGTIDDGYEIAEIAKYLNFINVMTYDFHGTWER--- 220

  Fly   257 VADFPAPIYELNERNPE---FNVNYQVKYWTGNRAPAAKINVGIATYGRAWKLTKDSGLTGLPPV 318
            .....:|:|:.::...:   ||.:|.::||..|..|..|:.:|.|.|||.::||......|.|  
Zfish   221 FTGHNSPLYQGSKDEGDLIYFNTDYAMRYWRDNGTPVEKLRMGFAAYGRTFRLTSSDTSVGAP-- 283

  Fly   319 AEADGVAPAGTQTQIPGLLSWPEVCAKLPNPANQHLKGADGPLRKVGDPTKRFGSYAYRSADDSG 383
              |.|.|.|||.|:..|..|:.|:|..|.....|.:..     :||...||              
Zfish   284 --ASGPASAGTYTREAGFWSYYEICGFLEGTTIQWIDD-----QKVPYATK-------------- 327

  Fly   384 ENGVWVGYEDPDTAAIKAEYVKREGLGGIAVVDLSFDDFRGGCTGHDKFPILRQVKSKL 442
             |..|||::..::...|..|:|.:..||..|..|..|||.|........|::..:::.|
Zfish   328 -NSEWVGFDTKESYETKVRYLKDKNFGGAFVWALDLDDFAGQFCSQGNHPLMAHLRNLL 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf4NP_001285068.1 GH18_IDGF 26..442 CDD:119352 122/431 (28%)
Glyco_18 27..420 CDD:214753 117/408 (29%)
chia.3NP_998378.1 Glyco_18 24..363 CDD:214753 117/407 (29%)
GH18_chitolectin_chitotriosidase 25..385 CDD:119351 122/428 (29%)
ChtBD2 421..469 CDD:214696
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592076
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.840

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