DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf4 and chia.4

DIOPT Version :9

Sequence 1:NP_001285068.1 Gene:Idgf4 / 31926 FlyBaseID:FBgn0026415 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_956740.1 Gene:chia.4 / 337333 ZFINID:ZDB-GENE-030131-9279 Length:475 Species:Danio rerio


Alignment Length:444 Identity:128/444 - (28%)
Similarity:205/444 - (46%) Gaps:83/444 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SLAIGQISAAGSHHLLCYYDGNSFVREGLSKLILTDLEPALQYCTHLVYGYAGINPSSNKLVS-- 75
            |||:.|...|.  .|.||:...|..|..:.|.:.::::|.|  ||||:|.::.|| ..|||.:  
Zfish    11 SLALCQCGLAS--QLACYFANWSQYRPDVGKYMPSNVDPHL--CTHLIYAFSVIN-IKNKLATSE 70

  Fly    76 -NNEKLDLDLGSSLFRQVTGLKRKYPALKVLLSVGGDKDTVDPENNKYLTLLESSNARIPFINSA 139
             |:|        :|::....||:..|.||.||:||    |::..:.::..::.:...|..||.|:
Zfish    71 WNDE--------TLYQSFNALKQSNPNLKTLLAVG----TLNLGSTQFSRMVSTPQKRQTFIESS 123

  Fly   140 HSLVKTYGFDGLDLGWQFPKNKPKKVHGSIGKFWKGFKKIFSGDHVVDEKAEEHKEAFTALVREL 204
            ...::|:|||||||.|::|        ||                  .|...|.|..||.|.:||
Zfish   124 IKFLRTHGFDGLDLDWEYP--------GS------------------GESPPEDKHRFTLLCKEL 162

  Fly   205 KNAFRPDGYI-----LGLSVLPNVNSSLF---FDVPAIINNLDYVNLHTYDFQTPERNNEVADFP 261
            ..|::.:...     |.|:........:.   :::..:...||::|:.||||.....|  |....
Zfish   163 LKAYQAESKATRRPRLMLTAAVAARKGIIDAGYEIAEVSKYLDFINIMTYDFHGSWEN--VTGHN 225

  Fly   262 APIYELNERNPE---FNVNYQVKYWTGNRAPAAKINVGIATYGRAWKLTKDSGLTGLPPVAEADG 323
            :|:|..:....:   :|.::.:.||....||..|:.:|.|.|||.:.|:  |.:.||.  |...|
Zfish   226 SPLYRDSRDTGDQIYYNTDFAMTYWRDQGAPVEKLRMGFAAYGRTFCLS--SAVNGLG--APVSG 286

  Fly   324 VAPAGTQTQIPGLLSWPEVCAKLPNPANQHLKGADGPLRKVGDPTKRFGSYAYRSADDSGENGVW 388
            .|.|||.|:..|..|:.|:|..|...:.:.:  ||   :||...|:             |.|  |
Zfish   287 PASAGTYTREAGYWSYYEICTFLQRASVEQI--AD---QKVPYATE-------------GLN--W 331

  Fly   389 VGYEDPDTAAIKAEYVKREGLGGIAVVDLSFDDFRGGCTGHDKFPILRQVKSKL 442
            ||::|..:...|.:|:|.:|.||..|..|..|||.|...|..|:|::..:.:.|
Zfish   332 VGFDDQKSYETKVDYLKEKGFGGAFVWSLDLDDFSGQFCGQGKYPLIGHLHTLL 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf4NP_001285068.1 GH18_IDGF 26..442 CDD:119352 122/429 (28%)
Glyco_18 27..420 CDD:214753 115/406 (28%)
chia.4NP_956740.1 Glyco_18 22..363 CDD:214753 115/407 (28%)
GH18_chitolectin_chitotriosidase 25..381 CDD:119351 121/422 (29%)
ChtBD2 425..473 CDD:214696
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592064
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.940

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