DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf4 and chia.6

DIOPT Version :9

Sequence 1:NP_001285068.1 Gene:Idgf4 / 31926 FlyBaseID:FBgn0026415 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_955897.2 Gene:chia.6 / 322420 ZFINID:ZDB-GENE-030131-1140 Length:480 Species:Danio rerio


Alignment Length:454 Identity:128/454 - (28%)
Similarity:216/454 - (47%) Gaps:90/454 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FSLLVG-SLAIGQISAAGSHHLLCYYDGNSFVREGLSKLILTDLEPALQYCTHLVYGYAGINPSS 70
            |..:.| |||:.....|.  .|:||:...|..|..:.|.:.::::|.|  ||||:|.::.|| :.
Zfish     4 FIFIAGFSLALCHFGLAS--QLVCYFTNWSQYRPDVGKYMPSNVDPHL--CTHLIYAFSIIN-NE 63

  Fly    71 NKLVS---NNEKLDLDLGSSLFRQVTGLKRKYPALKVLLSVGGDKDTVDPENNKYLTLLESSNAR 132
            |||.:   |:|        :|::...|||:..|.||.||:|||    .:....::.:::.:...|
Zfish    64 NKLTTYEWNDE--------TLYQSFNGLKQSNPNLKTLLAVGG----WNFGTTQFSSMVSTPQNR 116

  Fly   133 IPFINSAHSLVKTYGFDGLDLGWQFPKNKPKKVHGSIGKFWKGFKKIFSGDHVVDEKAEEHKEAF 197
            ..||.|:.:.::|:|||||||.|::|        ||.|                  ...|.|:.|
Zfish   117 QTFIQSSITFLRTHGFDGLDLDWEYP--------GSRG------------------SPPEDKQRF 155

  Fly   198 TALVRELKNAFRPDGYILGLSVL----------PNVNSSLFFDVPAIINNLDYVNLHTYDFQTPE 252
            |.|.:||..|::.:....|...|          .|:::.  :::..|...||::|:.||||....
Zfish   156 TLLCKELVEAYQAESAATGRPRLMLTAAVAAGKGNIDAG--YEIAEIAKYLDFINIMTYDFHGSW 218

  Fly   253 RNNEVADFPAPIY----ELNERNPEFNVNYQVKYWTGNRAPAAKINVGIATYGRAWKLTKDSGLT 313
            .:  |....:|:|    ::.:: ..:|.::.:.||....||..|:.:|.|.|||.::|:  |.::
Zfish   219 ES--VTGHNSPLYRGSGDIGDK-IYYNTDFAMTYWRDQGAPVEKLRMGFAAYGRTFRLS--SAVS 278

  Fly   314 GLPPVAEADGVAPAGTQTQIPGLLSWPEVCAKLPNPANQHLKGADGPLRKVGDPTKRFGSYAYRS 378
            |:.  |.|.|.|.|||.|:..|..|:.|:|..|.....|.:.....|             ||.:.
Zfish   279 GVG--APASGAASAGTYTREAGFWSYYEICTFLKQATVQQIVDQKVP-------------YATKG 328

  Fly   379 ADDSGENGVWVGYEDPDTAAIKAEYVKREGLGGIAVVDLSFDDFRGGCTGHDKFPILRQVKSKL 442
            .:       |||:::.::...|.:|:|.:|.||..|..|..|||.|...|..|:|::.|:::.|
Zfish   329 QE-------WVGFDNMESYKTKVDYLKEKGFGGAFVWALDLDDFSGQFCGQSKYPLIGQLRTLL 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf4NP_001285068.1 GH18_IDGF 26..442 CDD:119352 121/432 (28%)
Glyco_18 27..420 CDD:214753 113/409 (28%)
chia.6NP_955897.2 Glyco_18 22..363 CDD:214753 113/410 (28%)
GH18_chitolectin_chitotriosidase 23..385 CDD:119351 121/431 (28%)
CBM_14 433..479 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592058
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.840

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