DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf4 and Chit1

DIOPT Version :10

Sequence 1:NP_511101.2 Gene:Idgf4 / 31926 FlyBaseID:FBgn0026415 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001073157.1 Gene:Chit1 / 289032 RGDID:1305646 Length:464 Species:Rattus norvegicus


Alignment Length:454 Identity:129/454 - (28%)
Similarity:221/454 - (48%) Gaps:92/454 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LVGSLAIGQISA------AGSHHLLCYYDGNSFVREGLSKLILTDLEPALQYCTHLVYGYAGINP 68
            :|.|||:..::.      ..:..|.||:...:..|.|.::.:..|::|.|  |||::|.:||:|.
  Rat     1 MVQSLALAGVTTLLMIQWGSAAKLFCYFTNWAQYRSGAARFLPRDVDPNL--CTHVIYAFAGLNN 63

  Fly    69 SSNKLVSNNEKLDLDLGSSLFRQVTGLKRKYPALKVLLSVGGDKDTVDPENNKYLTLLESSNARI 133
            .....|..|::|       .::::..||::.|.||.||:|||    ......|:..::.:::.|.
  Rat    64 HQVSTVEPNDEL-------FYQELNSLKKRNPKLKTLLAVGG----WSFGTQKFTDMVATASTRQ 117

  Fly   134 PFINSAHSLVKTYGFDGLDLGWQFPKNKPKKVHGSIGKFWKGFKKIFSGDHVVDEKAEEHKEAFT 198
            .|:|||.|.::|:|||||||.|::|.::                    |...||      ||.||
  Rat   118 TFVNSALSFLRTHGFDGLDLDWEYPGSR--------------------GSPAVD------KERFT 156

  Fly   199 ALVRELKNAFRPDGYILGLSVL----------PNVNSSLFFDVPAIINNLDYVNLHTYDFQTPER 253
            ||:::|..||:.:....|.|.|          .:|::.  ::|..|:.:||::||..|||.:.. 
  Rat   157 ALIQDLAKAFQEEARASGKSRLLLTAAVPTGRGHVDAG--YEVDKIVQSLDFINLMAYDFHSSW- 218

  Fly   254 NNEVADFPAPIYEL---NERNPEFNVNYQVKYWTGNRAPAAKINVGIATYGRAWKL--TKDSGLT 313
             ::.....:|:|:.   ..::.|.||:..|..|.....||:|:.:|:..|||::.|  :.|||: 
  Rat   219 -DKTTGHNSPLYKRQGETGKDAEKNVDAAVTLWLQKGTPASKLMLGMPAYGRSFTLASSSDSGV- 281

  Fly   314 GLPPVAEADGVAPAGTQTQIPGLLSWPEVCAKLPNPANQHLKGADGPLRKVGDPTKRFGSYAYRS 378
            |.|    |.|....|..|:..|:|.:.|||:         .||.    :::.|....:.|     
  Rat   282 GAP----ATGPGAPGPYTKEKGILVYFEVCS---------WKGK----QRIEDQKVPYVS----- 324

  Fly   379 ADDSGENGVWVGYEDPDTAAIKAEYVKREGLGGIAVVDLSFDDFRGGCTGHDKFPILRQVKSKL 442
                 :...|||::|.::...||.|||::||||..|..|..|||:|......::|::|.:..:|
  Rat   325 -----QGNQWVGFDDRESFRAKAAYVKQKGLGGAMVWILDGDDFKGSFCNEGQYPLIRTLHQEL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf4NP_511101.2 GH18_IDGF 26..442 CDD:119352 124/430 (29%)
Chit1NP_001073157.1 GH18_chitolectin_chitotriosidase 24..383 CDD:119351 124/429 (29%)
ChtBD2 416..463 CDD:214696
Blue background indicates that the domain is not in the aligned region.

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