DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf4 and cht-4

DIOPT Version :9

Sequence 1:NP_001285068.1 Gene:Idgf4 / 31926 FlyBaseID:FBgn0026415 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_497437.2 Gene:cht-4 / 189507 WormBaseID:WBGene00021252 Length:360 Species:Caenorhabditis elegans


Alignment Length:452 Identity:108/452 - (23%)
Similarity:172/452 - (38%) Gaps:114/452 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LFSLLVGSLAIGQISAAGSHHLLCYYDGNSFVREGLSKLILTDLEPALQYCTHLVYGYAGINPSS 70
            :||||:..|.:..:..|      |||..|   :..:||:       ....|||::.    ||.:.
 Worm     5 IFSLLLLILPVHTVPVA------CYYILN---QPDISKV-------PKNLCTHIIL----INSAH 49

  Fly    71 NKLVSNNEKL-----DLDLGSSLFRQVTGLKRKYPALKVLLSVGGDKDTVDPENNKYLTLLESSN 130
               ||.:.:|     ||:..|.||..           |:.|.|     ::...|..:..|..::.
 Worm    50 ---VSEDGRLQGFEQDLEHFSELFDG-----------KIELFV-----SITSSNPSFSFLTSNTT 95

  Fly   131 ARIPFINSAHSLVKTYGFDGLDLGWQFPKNKPKKVHGSIGKFWKGFKKIFSGDHVVDEKAEEHKE 195
            ....|.::...:::.|..:|:|:.|:||                    ::|.|....:||.    
 Worm    96 LMHNFSSTVTQVLQKYRLNGVDIDWEFP--------------------VWSRDAQKSDKAH---- 136

  Fly   196 AFTALVRELKNAFRPDGYILGLSVL-PNVNSSLFFDVPAIINNLDYVNLHTYDFQTPER-NNEVA 258
             |...:|.||:..:|....|.::|. |...|...:||.|:....|.|.:..|||....| :|...
 Worm   137 -FATFLRILKSHLKPADLKLSVAVSGPPTISRKAYDVDALKMYADMVQIMNYDFHVFNRYSNPFV 200

  Fly   259 DFPAPIYELNERNP---EFNVNYQVKYWTGNRAPAAKINVGIATYGRAWKLTKDSGLTGLPPVAE 320
            .|.||::.:.....   |.|....:|.|.....|......||.||.||::|..........|...
 Worm   201 GFNAPLHPMRAEISVLGEMNAEASMKTWYDLGLPRNISFFGIPTYARAFQLLTHYLHKPYSPAIR 265

  Fly   321 ADGVAPAGTQTQIPGLLSWPEVC-----AKLPNPANQHLKGADGPLRKVGDPTKRFGSYAYRSAD 380
            |.           |.:.:.|:||     .......|.|   |..|             |.|    
 Worm   266 AR-----------PEITNLPDVCIFAQSGYYTTVWNHH---AQAP-------------YLY---- 299

  Fly   381 DSGENGVWVGYEDPDTAAIKAEYVKREGLGGIAVVDLSFDDFRGGCTGHDKFPILRQVKSKL 442
              |::|:||.||:..:...|..:.::..:||:.|..:..||..|.| ||..:|:|.:: |||
 Worm   300 --GDDGIWVSYENQQSILAKMAFARKLQVGGVMVFSIGSDDVTGKC-GHGPYPLLTKI-SKL 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf4NP_001285068.1 GH18_IDGF 26..442 CDD:119352 100/430 (23%)
Glyco_18 27..420 CDD:214753 91/407 (22%)
cht-4NP_497437.2 GH18_chitinase-like 30..357 CDD:385673 96/416 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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