DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf4 and chil-19

DIOPT Version :9

Sequence 1:NP_001285068.1 Gene:Idgf4 / 31926 FlyBaseID:FBgn0026415 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_496026.2 Gene:chil-19 / 187736 WormBaseID:WBGene00011162 Length:452 Species:Caenorhabditis elegans


Alignment Length:443 Identity:95/443 - (21%)
Similarity:171/443 - (38%) Gaps:134/443 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LLCYY---DGNSFVREGLSKLILTDLEPALQYCTHLVYGYAGINPSSNKLVSNNEKLDLDLGSSL 88
            ::.||   ..:...|:.:|||            ||.|:.:  :|.:|:    .:.::|.||..:.
 Worm    93 IIGYYFATQTSVITRDQVSKL------------THAVFAF--VNMTSD----GHLQIDGDLAKNR 139

  Fly    89 FRQVTGL-KRKYPALKVLLSVGGDKDTVDPENNKYLTLLESSNARIPFINSAHSLVKTYGFDGLD 152
            |..:..: |::.|.:||::|:||:.:     :|.:...|.|.:.:..||||..|.::||..||:|
 Worm   140 FTNLIEIAKQQTPQVKVMISIGGNDN-----SNNFKPGLSSPDRKKLFINSTVSFLQTYDIDGVD 199

  Fly   153 LGWQFPKNKPKKVHGSIGKFWKGFKKIFSGDHVVDEKAEEHKEAFTALVRELKNAFRPD--GYIL 215
            |.|::|           ||                    ..|:.::..:.:|:.:.:..  .||:
 Worm   200 LYWKWP-----------GK--------------------TSKDIYSQFINDLRYSLQRQKRNYIM 233

  Fly   216 GLSVLP----NVNSSLFFDVPAIINNLDYVNLHTYDFQTPERN-------------NEVADFPAP 263
            .: |||    ..|.....|:..|.:|:|::|:.|..:..|.:|             |.|...|. 
 Worm   234 SI-VLPPPDMGANYEAGIDIENIFDNVDFLNIFTMGYFGPWQNDAGMITGAASQLFNGVNGVPG- 296

  Fly   264 IYELNERNPEFNVNYQVKYWTGNRAPAAKINVGIATYGRAWKLTKDSGLTGLPPVAEADGVAPAG 328
                   ...:|:::..:.:......:.|.|:.|..|...||..|  |....|.:.........|
 Worm   297 -------RKTYNIHHSTERYVCKTGQSDKYNIAIPFYTMLWKHVK--GPVNPPNIEIYRNATFQG 352

  Fly   329 TQTQIPGLLSWPEVCAKL--------PNPA-NQHLKGADGPLRKVGDPTKRFGSYAYRSADDSGE 384
                  |::....:..||        .||. |..::.|                :.|.:..::  
 Worm   353 ------GVVGETSMSRKLVQEEGYDFSNPTYNPEIRAA----------------FKYNATTET-- 393

  Fly   385 NGVWVGYEDPDTAAIKAEYVKREGLGGIAVVDLSFDD----------FRGGCT 427
               ::.:|..||.|.|.:|||...|||:.:..:..||          |.|.||
 Worm   394 ---FLTFETNDTIAAKIDYVKDRILGGVWIWAVDMDDDSNNLLNLVKFTGYCT 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf4NP_001285068.1 GH18_IDGF 26..442 CDD:119352 95/443 (21%)
Glyco_18 27..420 CDD:214753 89/424 (21%)
chil-19NP_496026.2 Glyco_18 92..426 CDD:214753 89/424 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164381
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
54.700

Return to query results.
Submit another query.