DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf4 and chil-2

DIOPT Version :9

Sequence 1:NP_001285068.1 Gene:Idgf4 / 31926 FlyBaseID:FBgn0026415 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_496133.2 Gene:chil-2 / 182431 WormBaseID:WBGene00007466 Length:383 Species:Caenorhabditis elegans


Alignment Length:374 Identity:79/374 - (21%)
Similarity:151/374 - (40%) Gaps:89/374 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LQYCTHLVYGYAGINPSSNKLVSNNEKLDLDLGSSLFRQVTGLKRKYPALKVLLSVGGDKDTVDP 117
            |:..||.::....|.|:......|.|..:     |..|:.   |...|.||:::.:         
 Worm    56 LKKLTHFIFTSISIFPNGTIKWPNCENFE-----SYARKA---KMDNPNLKIMVEI--------- 103

  Fly   118 ENNKYLTLLESSNARIPFINSAHSLVKTYGFDGLDLGWQFPKNKPKKVHGSIGKFWKGFKKIFSG 182
             |.|:.::|.....:..||.|..|.|..:.|||:|:.|.:|:::     .:...|.|.|:     
 Worm   104 -NGKFFSVLAEDEKKNSFIKSISSFVVDHKFDGVDIFWSWPEDE-----DTFHLFIKEFR----- 157

  Fly   183 DHVVDEKAEEH---KEAFTALVRELKNAFRPDGYILGLSVLPNVNSSLFFDVPAIINNLDYVNLH 244
                 ||.|:|   ..|...|.::|:.                      |::..::|::|::|:.
 Worm   158 -----EKLEKHMIISIAIPRLAQQLEG----------------------FNLKLLMNHIDFLNVL 195

  Fly   245 TYDFQTPERNNEVADFP-APIYELNERNPEFNVNYQVKYWTGNRAPAAKINVGIATYGRAWKLTK 308
            :.::..|...|.....| :|:|. .:|.   ||:..:||.|......:.:|:|:...|..|...|
 Worm   196 SINYYEPLPGNGANIGPISPLYG-GQRG---NVDGTLKYLTCITKRPSILNMGVTFTGIFWNGVK 256

  Fly   309 DSGLTGLPPVAEADGVAPAGTQTQIPG-LLSWPEVCAKLPNPANQHLKGADGPLRKVGDPTKRFG 372
            | ||.      |.|.:.........|| .:.|           .:.:|.....:.:..|.:|  .
 Worm   257 D-GLN------EQDDIWKVAQNENGPGKSIGW-----------RKFIKDRRNTIPQWHDSSK--S 301

  Fly   373 SYAYRSADDSGENGVWVGYEDPDTAAIKAEYVKREGLGGIAVVDLSFDD 421
            |||:     ..::.:::.:|:..:.:.|..||:.:.:||:.:.::..||
 Worm   302 SYAW-----DPKSKIFLAFENEKSLSEKVIYVRNKNIGGLVIWNVDQDD 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf4NP_001285068.1 GH18_IDGF 26..442 CDD:119352 79/374 (21%)
Glyco_18 27..420 CDD:214753 77/371 (21%)
chil-2NP_496133.2 Glyco_18 42..344 CDD:214753 77/371 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164376
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.700

Return to query results.
Submit another query.