DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf4 and chil-1

DIOPT Version :9

Sequence 1:NP_001285068.1 Gene:Idgf4 / 31926 FlyBaseID:FBgn0026415 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001040740.1 Gene:chil-1 / 182430 WormBaseID:WBGene00007465 Length:465 Species:Caenorhabditis elegans


Alignment Length:419 Identity:90/419 - (21%)
Similarity:165/419 - (39%) Gaps:110/419 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 FVREGLSKLILTDLEPALQYCTHLVYGYAGINPSSNKLVSNNEKLDL--DLGSSLFRQVTGLKRK 98
            |...||::       ..||..||::|.:|         :..|..:.:  |.....|.::....|:
 Worm   126 FENSGLTR-------KQLQMLTHIIYLFA---------IPRNGVITIVDDRSLRKFEEMKSNARE 174

  Fly    99 YPA-LKVLLSVGGDKDTVDPENNKYLTLLESSNARIPFINSAHSLVKTYGFDGLDLGWQFPKNKP 162
            ..: ||:::|:||..:     :..:..|:.:..:|..|:||..|.|:.|..||:::.|.:|:.:.
 Worm   175 ASSTLKIMISIGGHYN-----SRSFSGLVFNETSRTVFVNSIVSFVEKYDIDGIEMFWMWPRYRD 234

  Fly   163 KKVHGSIGKFWKGFKKIFSGDHVVDEKAEEHKEAFTALVRELKNAFRPDGYILGLSVLPNVNSSL 227
            |..:           .:|         .:|.:.|||.|..:|.   |.:.:::.|....|:|  |
 Worm   235 KNNY-----------LMF---------IQELRYAFTELQNKLN---RKEDFVISLVASSNLN--L 274

  Fly   228 FFDVPAIINNLDYVNLH---TYDFQT-PERNNEVADFPAPIYELNERNPEFNVNYQVKYWTGNRA 288
            .|::...:|::|:..::   :|.:|. |:         :|:|....|    ||:..:||:.....
 Worm   275 LFNLVEFLNSVDFFGIYLFNSYSYQVGPD---------SPLYGGGSR----NVDEIMKYYICKTG 326

  Fly   289 PAAKINVGIATYGRAWKLTKDSGLTGLPPVAEADGVAPAGTQTQIPGLLSWPEVCAKLPNPANQH 353
            ..:|.|:.|:.:...|:     | |.||...::|.:.......::...|.|.|:.....|..|..
 Worm   327 QPSKFNIIISFHATYWE-----G-TDLPLRDDSDNIWKVNESGRLAVALRWRELPHHKWNLENIK 385

  Fly   354 LKGADGPLRKV------GDPTKRFGSYAYRSADDSGENGVWVGYEDPDTAAIKAEYVKREGLGGI 412
            ...    |.|.      |.||:                  ::..||..:...|..||....:|||
 Worm   386 FHN----LTKTSYIWIPGPPTR------------------FLTLEDEQSLREKNRYVADHNIGGI 428

  Fly   413 AV--VDLSFDDF--------RGGCTGHDK 431
            .:  :|...||.        ...|||.:|
 Worm   429 TMWTIDQDDDDHTLLKVVSSAELCTGEEK 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf4NP_001285068.1 GH18_IDGF 26..442 CDD:119352 90/419 (21%)
Glyco_18 27..420 CDD:214753 84/398 (21%)
chil-1NP_001040740.1 Glyco_18 118..436 CDD:214753 84/396 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164370
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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