DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf4 and chil-13

DIOPT Version :9

Sequence 1:NP_001285068.1 Gene:Idgf4 / 31926 FlyBaseID:FBgn0026415 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_496018.2 Gene:chil-13 / 174500 WormBaseID:WBGene00010945 Length:439 Species:Caenorhabditis elegans


Alignment Length:388 Identity:83/388 - (21%)
Similarity:146/388 - (37%) Gaps:101/388 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 THLVYGYAGINPSSNKLVSNNEKLDLDLGSSLFRQVTGLKRKYPALKVLLSVGGDKDTVDPENNK 121
            ||.|:.:..|. ....|..:|.|.||..  |:.:.    |.:...:::::|:||..     ||..
 Worm   103 THAVFAFVRIK-YDGTLQFDNSKADLRF--SILKD----KTRGSNVEMMVSIGGGY-----ENAH 155

  Fly   122 YL-TLLESSNARIPFINSAHSLVKTYGFDGLDLGWQFPKNKPKKVHGSIGKFWKGFKKIFSGDHV 185
            |. :.|..|..:..||:|..:.:..:..||:|..||                |...:..|:    
 Worm   156 YFASALSDSQKKKNFIDSILAFLVEHRIDGVDFFWQ----------------WPTVQDTFN---- 200

  Fly   186 VDEKAEEHKEAFTALVRELKNAF---RPDGYILGLSVLPNV---NSSLFFDVPAIINNLDYVNLH 244
                       :...:|||:...   :...:::.::| |..   |..|.||:..:.|::|:.|::
 Worm   201 -----------YVTFIRELRQKLDENKRKHFLISMTV-PAAGVDNWELGFDLEELQNHVDFFNVY 253

  Fly   245 TYDFQTPERNN-EVADFPAP--IYELNERNPEFNVNYQVKYWTGNRAPAAKINVGIATYGRAWKL 306
            :.|:..|..|. .|...|:.  .|.:..|. .|.|::.:|::|......:.:|:.|....|.|..
 Worm   254 SMDYAGPWPNQWGVPTGPSSPMFYNIGARK-NFYVDWTMKHYTCKLKQPSMLNMVIPFSARIWNN 317

  Fly   307 TKDS--GLTGLPPVAEADGVAPAGTQTQI-------PGL----LSWPEVCAKLPNPANQHLKGAD 358
            .:::  ..|.:...||.......| :|||       .||    .||..:..   .|....||   
 Worm   318 VQEAIDNRTEVFRNAELKNNMAEG-RTQISRWTAEHEGLELSPSSWDNLTM---TPYILDLK--- 375

  Fly   359 GPLRKVGDPTKRFGSYAYRSADDSGENGVWVGYEDPDTAAIKAEYVKREGLGGIAVVDLSFDD 421
                     .|.|                 :.:||..:..||.:|.|:..|||:.:..:..||
 Worm   376 ---------AKTF-----------------LTFEDKRSIKIKTDYAKKMDLGGVWLWSVDMDD 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf4NP_001285068.1 GH18_IDGF 26..442 CDD:119352 83/388 (21%)
Glyco_18 27..420 CDD:214753 81/385 (21%)
chil-13NP_496018.2 Glyco_18 81..411 CDD:214753 81/385 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164390
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.700

Return to query results.
Submit another query.