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Protein Alignment Idgf4 and Chia

DIOPT Version :9

Sequence 1:	NP_001285068.1	Gene:	Idgf4 / 31926	FlyBaseID:	FBgn0026415	Length:	442	Species:	Drosophila melanogaster
Sequence 2:	NP_997469.1	Gene:	Chia / 113901	RGDID:	1303058	Length:	473	Species:	Rattus norvegicus

Alignment Length:	451	Identity:	128/451 - (28%)
Similarity:	201/451 - (44%)	Gaps:	86/451 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 LLVGSLAIGQISAAGSHHLLCYYDGNSFVREGLSKLILTDLEPALQYCTHLVYGYAGINPSSNKL 73
            |:.|.:.:..:....:::|:||:...:..|.||......|:.|.|  ||||:|.:||:   .|..
  Rat     6 LVTGLVLLLNVQLGSAYNLVCYFTNWAQYRPGLGSFKPDDINPCL--CTHLIYAFAGM---QNNQ 65

  Fly    74 VSNNEKLDLDLGSSLFRQVTGLKRKYPALKVLLSVGGDKDTVDPENNKYLTLLESSNARIPFINS 138
            ::..|..|:    :|::....||.:...||.||::||......|    :.|::.:|..|..||.|
  Rat    66 ITTIEWNDV----TLYKAFNDLKNRNSKLKTLLAIGGWNFGTAP----FTTMVSTSQNRQTFITS 122

  Fly   139 AHSLVKTYGFDGLDLGWQFPKNKPKKVHGSIGKFWKGFKKIFSGDHVVDEKAEEHKEAFTALVRE 203
            ....::.||||||||.|::|        ||.|                  ...:.|..||.||:|
  Rat   123 VIKFLRQYGFDGLDLDWEYP--------GSRG------------------SPPQDKHLFTVLVKE 161

  Fly   204 LKNAF--------RPDGYILGLSVLPNVNSSLFFDVPAIINNLDYVNLHTYDFQ------TPERN 254
            |:.||        ||...:.........|....:::|.:...||::::.|||..      |.|.
  Rat   162 LREAFEQEAIESNRPRLMVTAAVAAGISNIQAGYEIPELSQYLDFIHVMTYDLHGSWDGYTGEN- 225

  Fly   255 NEVADFPAPIYEL---NERNPEFNVNYQVKYWTGNRAPAAKINVGIATYGRAWKLTKDSGLTGLP 316
                   :|:|:|   ...|...||:|.:.||..|.|||.|:.||...||..:.|:..|. ||:.
  Rat   226 -------SPLYKLPTETGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPEYGHTYILSNPSD-TGIG 282

  Fly   317 PVAEADGVAPAGTQTQIPGLLSWPEVCAKLPNPANQHLKGADGPLRKVGDPTKRFGSYAYRSADD 381
              |...|..|||..|:..|..::.|:|..|.|.|.|..   |.| ::|        .|||:..:
  Rat   283 --APTSGNGPAGPYTRQAGFWAYYEICTFLRNGATQDW---DAP-QEV--------PYAYKGNE- 332

  Fly   382 SGENGVWVGYEDPDTAAIKAEYVKREGLGGIAVVDLSFDDFRGGCTGHDKFPILRQVKSKL 442
                  ||||::..:.::||:::|:...||..:..:..|||.|......|||:...:...|
  Rat   333 ------WVGYDNIKSFSVKAQWLKQNNFGGAMIWAIDLDDFTGSFCDQGKFPLTSTLNKAL 387

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.