DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf4 and CHI3L1

DIOPT Version :9

Sequence 1:NP_001285068.1 Gene:Idgf4 / 31926 FlyBaseID:FBgn0026415 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001267.2 Gene:CHI3L1 / 1116 HGNCID:1932 Length:383 Species:Homo sapiens


Alignment Length:444 Identity:122/444 - (27%)
Similarity:192/444 - (43%) Gaps:85/444 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 GSLAIGQISAAGSHHLLCYYDGNSFVREGLSKLILTDLEPALQYCTHLVYGYAGINPSSNKLVSN 76
            |.:.:..:....::.|:|||...|..|||........|:..|  |||::|.:|.|   ||..:..
Human     9 GFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFL--CTHIIYSFANI---SNDHIDT 68

  Fly    77 NEKLDLDLGSSLFRQVTGLKRKYPALKVLLSVGGDKDTVDPENNKYLTLLESSNARIPFINSAHS 141
            .|..|:    :|:..:..||.:.|.||.||||||    .:..:.::..:..::.:|..||.|...
Human    69 WEWNDV----TLYGMLNTLKNRNPNLKTLLSVGG----WNFGSQRFSKIASNTQSRRTFIKSVPP 125

  Fly   142 LVKTYGFDGLDLGWQFPKNKPKKVHGSIGKFWKGFKKIFSGDHVVDEKAEEHKEAFTALVRELKN 206
            .::|:|||||||.|.:|..:.|                            :|   ||.|::|:|.
Human   126 FLRTHGFDGLDLAWLYPGRRDK----------------------------QH---FTTLIKEMKA 159

  Fly   207 AF----RPDGYILGLSVL-----PNVNSSLFFDVPAIINNLDYVNLHTYDFQTPERNNEVADFPA 262
            .|    :|....|.||..     ..::||  :|:..|..:||::::.||||....|.  .....:
Human   160 EFIKEAQPGKKQLLLSAALSAGKVTIDSS--YDIAKISQHLDFISIMTYDFHGAWRG--TTGHHS 220

  Fly   263 PIYELNE-RNPE--FNVNYQVKYWTGNRAPAAKINVGIATYGRAWKLTKDSGLTGLPPVAEADGV 324
            |::...| .:|:  .|.:|.|.|.....|||:|:.:||.|:||::.|.......|.|    ..|.
Human   221 PLFRGQEDASPDRFSNTDYAVGYMLRLGAPASKLVMGIPTFGRSFTLASSETGVGAP----ISGP 281

  Fly   325 APAGTQTQIPGLLSWPEVCAKLPNPANQHLKGADGPLRKVGDPTKRFGSYAYRSADDSGENGVWV 389
            ...|..|:..|.|::.|:|..|.......:.|...|....|:.                    ||
Human   282 GIPGRFTKEAGTLAYYEICDFLRGATVHRILGQQVPYATKGNQ--------------------WV 326

  Fly   390 GYEDPDTAAIKAEYVKREGLGGIAVVDLSFDDFRGGCTGHD-KFPILRQVKSKL 442
            ||:|.::...|.:|:|...|.|..|..|..|||:|...|.| :||:...:|..|
Human   327 GYDDQESVKSKVQYLKDRQLAGAMVWALDLDDFQGSFCGQDLRFPLTNAIKDAL 380

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Idgf4NP_001285068.1 GH18_IDGF 26..442 CDD:119352 120/428 (28%)
Glyco_18 27..420 CDD:214753 111/404 (27%)
CHI3L1NP_001267.2 Glyco_18 23..357 CDD:214753 111/405 (27%)
GH18_chitolectin_chitotriosidase 24..380 CDD:119351 120/427 (28%)