DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Ser7 and LOC683849

DIOPT Version :9

Sequence 1:	NP_572582.1	Gene:	Ser7 / 31917	FlyBaseID:	FBgn0019929	Length:	397	Species:	Drosophila melanogaster
Sequence 2:	XP_003749780.1	Gene:	LOC683849 / 683849	RGDID:	1597830	Length:	246	Species:	Rattus norvegicus

Alignment Length:	288	Identity:	95/288 - (32%)
Similarity:	129/288 - (44%)	Gaps:	69/288 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly   125 GSAFSF------RLVGGHNTGLFEFPWTTLLEYETVSGGKDYACGASFIAQRWLLTAAHCIHTMG 183
            |:|.:|      ::|||:.......|:...|.    ||  .:.||.|.|..:|:::||||.
  Rat    11 GTAVAFPVDDDDKIVGGYTCQENSVPYQVSLN----SG--YHFCGGSLINDQWVVSAAHCY---- 65

  Fly   184 RNLTAAILGEWNRDTDPDCENDLNGVRECAPPHIRVTIDRILPHAQYSELNYRNDIALLRLSRPV 248
            ::.....|||.|       .|.|.|..:.      |...:|:.|..:......|||.|::||.||
  Rat    66 KSRIQVRLGEHN-------INVLEGNEQF------VNAAKIIKHPNFDRKTLNNDIMLIKLSSPV 117

  Fly   249 NW---LQMQNLEPVCLPPQRGRYANQLAGSAADVSGWGKTESSGSSKIKQKAMLH-----IQPQD 305
            ..   :....|...|.|          ||:...:||||.|.|.|   :.:..:|.     :.||.
  Rat   118 KLNARVATVALPSSCAP----------AGTQCLISGWGNTLSFG---VNEPDLLQCLDAPLLPQA 169

  Fly   306 QCQEAFYKDTKITLADSQMCAGG-EIGVDSCSGDSGGPLTVEANTASGNRYVYLAGVVSIGRKHC 369
            .| ||.|.. |||  |:.:|||. |.|.|||.||||||:.....         |.|:||.|   .
  Rat   170 DC-EASYPG-KIT--DNMVCAGFLEGGKDSCQGDSGGPVVCNGE---------LQGIVSWG---Y 218

  Fly   370 GTAL--FSGIYTRVSSYMDWIESTIRAN 395
            |.||  ..|:||:|.:|:||||.||.||
  Rat   219 GCALPDNPGVYTKVCNYVDWIEDTIAAN 246

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ser7	NP_572582.1	CLIP	29..74	CDD:197829
		Tryp_SPc	131..388	CDD:214473	85/267 (32%)
		Tryp_SPc	133..391	CDD:238113	88/268 (33%)
LOC683849	XP_003749780.1	Tryp_SPc	23..239	CDD:214473	85/267 (32%)
LOC683849	XP_003749780.1	Tryp_SPc	24..242	CDD:238113	88/269 (33%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910