DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser7 and LOC562139

DIOPT Version :9

Sequence 1:NP_572582.1 Gene:Ser7 / 31917 FlyBaseID:FBgn0019929 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001075159.1 Gene:LOC562139 / 562139 -ID:- Length:263 Species:Danio rerio


Alignment Length:271 Identity:84/271 - (30%)
Similarity:127/271 - (46%) Gaps:46/271 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 RLVGGHNTGLFEFPWTTLLEYETVSGGKDYACGASFIAQRWLLTAAHC-IHTMGRNLTAAILGEW 194
            |:|.|.......:||...|:..|   |..: ||.|.|.:.|::||||| :.|..|    .||||.
Zfish    33 RIVNGEEAVPHSWPWQVSLQDST---GFHF-CGGSLINEWWVVTAAHCNVRTSHR----VILGEH 89

  Fly   195 NRDTDPDCENDLNGVRECAPPHIRVTIDRILPHAQYSELNYRNDIALLRLSRP--VNWLQMQNLE 257
            :|.::             |.|...:|:.::..|..::.....|||.|::|:.|  :|    .::.
Zfish    90 DRSSN-------------AEPIQTMTVGKVFKHPNFNMFTINNDILLIKLATPAKIN----THVS 137

  Fly   258 PVCLPPQRGRYANQLAGSAADVSGWGKTESSG--SSKIKQKAMLHIQPQDQCQEAFYKDTKITLA 320
            ||||......:.   .|.....||||.|:.:.  :..:.|:|.|.:...:.|:.  :...|||  
Zfish   138 PVCLAETNDNFP---GGMKCVTSGWGLTKHNAPDTPALLQQAALPLLTNEDCKR--FWGNKIT-- 195

  Fly   321 DSQMCAGGEIGVDSCSGDSGGPLTVEANTASGNRYVY-LAGVVSIGRKHCGTALFSGIYTRVSSY 384
            |..:|||.. |..||.|||||||..:.:.      |: |.|:||.|...|.|: ..|:|.||:..
Zfish   196 DLMVCAGAS-GASSCMGDSGGPLVCQKDG------VWTLVGIVSWGSSVCSTS-SPGVYARVTKL 252

  Fly   385 MDWIESTIRAN 395
            ..|::.||.||
Zfish   253 RAWVDQTITAN 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser7NP_572582.1 CLIP 29..74 CDD:197829
Tryp_SPc 131..388 CDD:214473 79/262 (30%)
Tryp_SPc 133..391 CDD:238113 79/263 (30%)
LOC562139NP_001075159.1 Tryp_SPc 33..256 CDD:214473 79/262 (30%)
Tryp_SPc 34..259 CDD:238113 79/264 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.