DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser7 and habp2

DIOPT Version :9

Sequence 1:NP_572582.1 Gene:Ser7 / 31917 FlyBaseID:FBgn0019929 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001103843.2 Gene:habp2 / 553472 ZFINID:ZDB-GENE-030131-4721 Length:546 Species:Danio rerio


Alignment Length:479 Identity:117/479 - (24%)
Similarity:171/479 - (35%) Gaps:147/479 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GKAIMHFGN-CNSVEFGRGTCIEKKDCDFYAVD----------KLMELASKQQCFS-------RQ 66
            ||...:..| |..|:.|.|.|:..|...||...          |.....:...|.:       |.
Zfish   108 GKKCQNEKNVCKKVKCGNGDCVRIKKDPFYECKCWPPYRGSKCKNAYACNPSPCQNGGTCVKGRT 172

  Fly    67 RPDLVC-CPRETNIIPPLAPRI----------SNGTT---NATSSTTTLKLLPRTTPRPP----S 113
            |....| ||.:      .:.|.          .||.:   |.:.:...::.||......|    .
Zfish   173 RASFTCTCPED------YSGRFCQVGSNDCYEGNGESYRGNVSETIEEIECLPWNHNLIPYKEFE 231

  Fly   114 GIDQLPEHPYC--------------------------------------------------GSAF 128
            |.:.:.||.||                                                  .:||
Zfish   232 GNESIGEHNYCRNPDGDREPWCFVKEKGKLQWNYCNVKPCSETEPEKPLTTPTKLEFSDCGKAAF 296

  Fly   129 SF---RLVGGHNTGLFEFPWTTLLEYETVSGGK--DYACGASFIAQRWLLTAAHCIHTMGRNLTA 188
            |.   |:.||..:.....||....:........  ::.||.:.|...|:|||||||         
Zfish   297 SMIAPRIFGGRKSLPEAHPWQASFQVRPKGSNATFEHNCGGTLIDSCWILTAAHCI--------- 352

  Fly   189 AILGEWNRDTDPDCENDLNGV--RECAPPHIRVTIDRILPHAQYSEL--NYRNDIALLRL----S 245
                    |.:.:...:|.||  .:..|....|.:::|:.|..|:|.  ...||||||:|    .
Zfish   353 --------DENDEVRVELGGVNLEKDDPDKQFVEVEKIIVHENYTETFDALYNDIALLKLKGRNG 409

  Fly   246 RPVNWLQMQNLEPVCLP----PQRGRYANQLAGSAADVSGWGKTES-SGSSKIKQKAMLHIQPQD 305
            |..|  :.:::...|||    |:         |:...:||:|.||. .|.|.....|.:.:..|.
Zfish   410 RCAN--ESRSVRAACLPTDLFPE---------GTRCTISGYGATEKHHGVSTQLLDAKVLLISQS 463

  Fly   306 QCQEAFYKDTKITLADSQMCAGGEIG-VDSCSGDSGGPLTVEANTASGNRYVYLAGVVSIGRKHC 369
            :|........:  :.||.||||...| :|||.|||||||..:.:..   .|:|  ||||.| ..|
Zfish   464 RCMSRNVYGNR--MDDSMMCAGYMQGKIDSCQGDSGGPLVCKKDNI---HYIY--GVVSWG-DSC 520

  Fly   370 GTALFSGIYTRVSSYMDWIESTIR 393
            |.....|:|.||:.::|||...:|
Zfish   521 GKKNKPGVYARVTKFIDWINEKMR 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser7NP_572582.1 CLIP 29..74 CDD:197829 13/62 (21%)
Tryp_SPc 131..388 CDD:214473 81/272 (30%)
Tryp_SPc 133..391 CDD:238113 82/273 (30%)
habp2NP_001103843.2 EGF_CA 80..112 CDD:238011 2/3 (67%)
EGF_CA 158..190 CDD:238011 7/37 (19%)
KR 195..273 CDD:214527 11/77 (14%)
Tryp_SPc 302..539 CDD:214473 81/272 (30%)
Tryp_SPc 303..542 CDD:238113 82/274 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.