DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser7 and Hgfac

DIOPT Version :9

Sequence 1:NP_572582.1 Gene:Ser7 / 31917 FlyBaseID:FBgn0019929 Length:397 Species:Drosophila melanogaster
Sequence 2:XP_006504094.1 Gene:Hgfac / 54426 MGIID:1859281 Length:658 Species:Mus musculus


Alignment Length:326 Identity:91/326 - (27%)
Similarity:146/326 - (44%) Gaps:69/326 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 TTLKLLPRTTPRPPSGIDQLPE-----HPYCGSAF---SF---RLVGGHNTGLFEFPWTTLLEYE 152
            |..:.|.|...:.|..:..|||     .|.||...   :|   |::||.::.....||...:.. 
Mouse   362 TACESLARVHSQTPEILAALPESAPAVRPTCGKRHKKRTFLRPRIIGGSSSLPGSHPWLAAIYI- 425

  Fly   153 TVSGGKDYACGASFIAQRWLLTAAHCI-HTMGRNLTAAILGE--WNRDTDPDCENDLNGVRECAP 214
                |..: |..|.:...|:::||||. ::..|:....:||:  :||.||               
Mouse   426 ----GNSF-CAGSLVHTCWVVSAAHCFANSPPRDSITVVLGQHFFNRTTD--------------- 470

  Fly   215 PHIRVT----IDRILPHAQYSELNYRN-DIALLRLSRPVN--WLQMQNLEPVCLPPQRGRYANQL 272
                ||    |::.:|:..||..|..| |:.|:||.:...  .::.|.::|:|||.....:.   
Mouse   471 ----VTQTFGIEKYVPYTLYSVFNPNNHDLVLIRLKKKGERCAVRSQFVQPICLPEAGSSFP--- 528

  Fly   273 AGSAADVSGWG-------KTESSGSSKIKQKAMLHIQPQDQCQ--EAFYKDTKITLADSQMCAG- 327
            .|....::|||       .|:.|..|....:|::.:....:|.  |.:..|    ::.:.:||| 
Mouse   529 TGHKCQIAGWGHMDEMQSSTDVSSYSNSLLEALVPLVADHKCSSPEVYGAD----ISPNMLCAGY 589

  Fly   328 GEIGVDSCSGDSGGPLTVEANTASGNRYVYLAGVVSIGRKHCGTALFSGIYTRVSSYMDWIESTI 392
            .:...|:|.|||||||..|.|..:     ||.|::|.| ..||.....|:||||::|:|||...|
Mouse   590 FDCKSDACQGDSGGPLVCEKNGVA-----YLYGIISWG-DGCGRLNKPGVYTRVANYVDWINDRI 648

  Fly   393 R 393
            |
Mouse   649 R 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser7NP_572582.1 CLIP 29..74 CDD:197829
Tryp_SPc 131..388 CDD:214473 76/276 (28%)
Tryp_SPc 133..391 CDD:238113 77/277 (28%)
HgfacXP_006504094.1 FN2 99..145 CDD:128373
EGF_CA 159..194 CDD:238011
FN1 197..237 CDD:238018
EGF_CA 242..275 CDD:238011
Kringle 283..364 CDD:333799 1/1 (100%)
Tryp_SPc 406..646 CDD:238113 77/277 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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