DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser7 and F10

DIOPT Version :9

Sequence 1:NP_572582.1 Gene:Ser7 / 31917 FlyBaseID:FBgn0019929 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_058839.1 Gene:F10 / 29243 RGDID:61850 Length:482 Species:Rattus norvegicus


Alignment Length:406 Identity:109/406 - (26%)
Similarity:171/406 - (42%) Gaps:76/406 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GNCNSVEFGRGTC-----IEKKDCDFYAVDKLMELASKQQC--FSRQRPDLVCCP--------RE 76
            |.|.. ..|..||     .|.|:|:.: |.||..| ....|  |.|:..:.|.|.        .:
  Rat    99 GECRD-GLGSYTCTCTEGFEGKNCELF-VRKLCSL-DNGDCDQFCREEQNSVVCSCAKGYFLGND 160

  Fly    77 TNIIPPLAPRISNGTTNATSSTTTLKLLPRTTPRPPSGIDQLPE-------------------HP 122
            .......|| ...|.||...:..::.|  .|:...|...|.:|:                   .|
  Rat   161 GKSCLSTAP-FPCGKTNKGRAKRSVAL--NTSNSEPDPEDLMPDADILYPTESPSELLNLNKTEP 222

  Fly   123 YCGSAFSFRLVGGHNTGLFEFPWTTLL--EYETVSGGKDYACGASFIAQRWLLTAAHCIHTMGRN 185
            ...|....|:|||......|.||..||  :.||     |..||.:.:.:.::||||||:|...| 
  Rat   223 EANSDDVIRIVGGQECKRGECPWQALLFSDEET-----DGFCGGTILNEFYILTAAHCLHQAKR- 281

  Fly   186 LTAAILGEWNRDTDPDCENDLNGVRECAPPHIRVTIDRILPHAQYSELNYRNDIALLRLSRPVNW 250
             ....:|:.|.:.:...|.    |.|         :|.|:.|.::....|..|||:|||..|:.:
  Rat   282 -FKVRVGDLNTEQEDGGEM----VHE---------VDMIIKHNKFQRDTYDFDIAMLRLKTPITF 332

  Fly   251 LQMQNLEPVCLPPQRGRYANQLAGSAADVSGWGKTESSG-SSKIKQKAMLHIQPQDQCQEAFYKD 314
              .:|:.|.|||.:....|..:......|||:|:|...| .||:.:...:....::.|:    ..
  Rat   333 --RENVAPACLPQKDWAEATLMTQKTGIVSGFGRTHEKGRQSKVLKMMEVPYVDRNTCR----LS 391

  Fly   315 TKITLADSQMCAGGEI-GVDSCSGDSGGPLTVEANTASGNRYVYLAGVVSIGRKHCGTALFSGIY 378
            |..::..:..|||.:. ..|:|.||||||..    |...:.| ::.|:||.| :.|......|||
  Rat   392 TSFSITQNMFCAGYDAKQEDACQGDSGGPHV----TRFKDTY-FVTGIVSWG-EGCARKGKYGIY 450

  Fly   379 TRVSSYMDWIESTIRA 394
            |:|::::.||:.:::|
  Rat   451 TKVTAFLKWIDRSMKA 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser7NP_572582.1 CLIP 29..74 CDD:197829 15/51 (29%)
Tryp_SPc 131..388 CDD:214473 77/260 (30%)
Tryp_SPc 133..391 CDD:238113 78/261 (30%)
F10NP_058839.1 GLA 23..84 CDD:214503
EGF_CA 86..122 CDD:238011 7/23 (30%)
FXa_inhibition 129..164 CDD:405372 6/35 (17%)
Tryp_SPc 232..462 CDD:238113 78/261 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D402896at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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