DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser7 and LOC116411715

DIOPT Version :9

Sequence 1:NP_572582.1 Gene:Ser7 / 31917 FlyBaseID:FBgn0019929 Length:397 Species:Drosophila melanogaster
Sequence 2:XP_031760387.1 Gene:LOC116411715 / 116411715 -ID:- Length:386 Species:Xenopus tropicalis


Alignment Length:285 Identity:87/285 - (30%)
Similarity:132/285 - (46%) Gaps:40/285 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 CGSAFSF----RLVGGHNTGLFEFPWTTLLEYETVSGGKDYA--CGASFIAQRWLLTAAHCI-HT 181
            ||:...|    |:|||.|:...::||...::..|   ||:::  ||.|.:.:.|:||||||. |.
 Frog    30 CGNRPLFNKGSRIVGGQNSPPGKWPWMVSIQSPT---GKEFSHLCGGSVLNEIWVLTAAHCFKHL 91

  Fly   182 MGRNLTAA---ILGEWNRDTDPDCENDLNGVRECAPPHIRVTIDRILPHAQYSELNYRNDIALLR 243
            ..:..|.:   :.|          .|:|..:....  .||...:.|.|.| |:.....|||.|||
 Frog    92 QRKEETKSWRLVFG----------ANNLKVLESSV--QIRKIKEVIQPKA-YNPTTEANDITLLR 143

  Fly   244 LSRPVNWLQMQNLEPVCLPPQRGRYANQLAGSAADVSGWG--KTESSGSSKIKQKAMLHIQPQDQ 306
            |.:|:.:...  ::|.|.|.:   :||....:...::|||  ..||...|:|.|:|.:|.....:
 Frog   144 LDKPIVFTDY--VQPACFPTE---FANVEKKTDCYIAGWGVLDEESGEPSEILQEARVHQIDSKK 203

  Fly   307 CQEAFYKDTKITLADSQMCAGGEI-GVDSCSGDSGGPLTVEANTASGNRYVYLAGVVSIGRKHCG 370
            |....:.|..|  .:..:|||.|. |:|||.|||||||.  ..|.....|. :.|:.|.| ..|.
 Frog   204 CNSKDWYDGAI--GEYNLCAGHEKGGIDSCQGDSGGPLM--CKTQKSRTYA-VVGITSWG-SGCA 262

  Fly   371 TALFSGIYTRVSSYMDWIESTIRAN 395
            .....|:||....::.||.|.:..:
 Frog   263 RGKKPGVYTSTKYFIKWIASKVETD 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser7NP_572582.1 CLIP 29..74 CDD:197829
Tryp_SPc 131..388 CDD:214473 81/265 (31%)
Tryp_SPc 133..391 CDD:238113 82/266 (31%)
LOC116411715XP_031760387.1 Tryp_SPc 41..280 CDD:214473 81/265 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.