DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser7 and klkb1

DIOPT Version :9

Sequence 1:NP_572582.1 Gene:Ser7 / 31917 FlyBaseID:FBgn0019929 Length:397 Species:Drosophila melanogaster
Sequence 2:XP_002934450.3 Gene:klkb1 / 100486524 XenbaseID:XB-GENE-985051 Length:629 Species:Xenopus tropicalis


Alignment Length:403 Identity:111/403 - (27%)
Similarity:178/403 - (44%) Gaps:94/403 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LTLLGAEAQQFGKAIMHFGNCNSVEFGRG------TCIEKKDCDFYAVDKLMELASKQQCFSRQR 67
            ||:| ::|:..|..::       ||...|      .|.....|.|:....:....|:.:|     
 Frog   292 LTIL-SDAEFLGDELL-------VEEVSGEKECQQECTNNIRCQFFTYRPMQSGCSENKC----- 343

  Fly    68 PDLVCCPRETNIIPPLAPRISNGTTNATSSTTTLKLLPRTTPRPPSGIDQLPEHPYCGSAFSFRL 132
               .|..:.::...|...|..||..:..|    |:|....:.:   |..:..||       :.|:
 Frog   344 ---KCHMKISSNGLPTGIRHGNGEISGFS----LRLCKIKSVK---GCGEPIEH-------ANRI 391

  Fly   133 VGGHNTGLFEFPWTTLLEYETVSGGKDYACGASFIAQRWLLTAAHC--IHTMGR----------- 184
            |||.::.|.|:||...:.....:..|.:|||.|.|:.:|::|||||  :|.:.:           
 Frog   392 VGGTDSVLGEWPWQVSMHLRLTASYKKHACGGSIISNQWIVTAAHCFAMHPLPQMWIIYSGVVKL 456

  Fly   185 -NLTAAILGEWNRDTDPDCENDLNGVRECAPPHIRVTIDRILPHAQYSELNYRNDIALLRLSRPV 248
             |:|         .:.|..|.                 ::|:.|..|:......|||||:|..|:
 Frog   457 SNIT---------QSTPFSET-----------------EQIIIHPHYTGAGNGTDIALLKLKTPI 495

  Fly   249 NWLQMQNLEPVCLPPQRGRYANQLAGSAADVSGWGKTESSGS-SKIKQKAMLHIQPQDQCQEAFY 312
            ::...|  :.:||||:...:   :..::..::|||.||.||| :.|.|||.:.....::|| ..|
 Frog   496 SFNDHQ--KAICLPPREPTF---VLPNSCWITGWGFTEESGSLANILQKAEVPQISTEECQ-GNY 554

  Fly   313 KDTKITLADSQ-MCAGGEIG-VDSCSGDSGGPLTVEANTASGNRYVYLAGVVSIGRKHCGTALFS 375
            :.|:|   |.: :|||.:.| :|||.|||||||....     :...||.|:.|.| :.|......
 Frog   555 EQTRI---DKKILCAGYKRGKIDSCKGDSGGPLACVV-----DEIWYLTGITSWG-EGCARPGKP 610

  Fly   376 GIYTRVSSYMDWI 388
            |:|||||.:.|||
 Frog   611 GVYTRVSEFTDWI 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser7NP_572582.1 CLIP 29..74 CDD:197829 9/50 (18%)
Tryp_SPc 131..388 CDD:214473 85/273 (31%)
Tryp_SPc 133..391 CDD:238113 86/273 (32%)
klkb1XP_002934450.3 APPLE 21..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 290..373 CDD:128519 20/100 (20%)
Tryp_SPc 391..626 CDD:238113 86/274 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.