DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and ACA3

DIOPT Version :10

Sequence 1:NP_572581.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_196038.1 Gene:ACA3 / 830296 AraportID:AT5G04180 Length:277 Species:Arabidopsis thaliana


Alignment Length:275 Identity:65/275 - (23%)
Similarity:113/275 - (41%) Gaps:62/275 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 ISGPAFWGLINPEWSLCNKGRRQSPVNLEPQ--RLLFDPN------LRPMHIDKHRISGLITNTG 91
            |:.|:.|..|..||.:|..|:||||:||.|:  |::.:..      .:|       :..::.|.|
plant    33 IADPSKWSSIKAEWKICGTGKRQSPINLTPKIARIVHNSTEILQTYYKP-------VEAILKNRG 90

  Fly    92 HSVIF----TAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPA 152
            ..:..    .||...:.:.|                |:..:.|.|      ..|||.::|.....
plant    91 FDMKVKWEDDAGKIVINDTD----------------YKLVQSHWH------APSEHFLDGQRLAM 133

  Fly   153 EIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGD-EAFVKRL 216
            |:.:      ::.:....|    .::||  |.:.|: .||.:..:.|::.:|....| |..:.::
plant   134 ELHM------VHKSVEGHL----AVIGV--LFREGE-PNAFISRIMDKIHKIADVQDGEVSIGKI 185

  Fly   217 SIRGLLPDTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAPLGNN 281
            ..|....|...:..|.||.|.|.|.|.|.|.::||...::::|:..|....:|..:       .|
plant   186 DPREFGWDLTKFYEYRGSLTTPPCTEDVMWTIINKVGTVSREQIDVLTDARRGGYE-------KN 243

  Fly   282 YRPPQPLLHRPIRTN 296
            .||.|||..|.:..|
plant   244 ARPAQPLNGRLVYLN 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_572581.1 alpha_CARP_X_XI_like 37..298 CDD:239395 64/273 (23%)
ACA3NP_196038.1 alpha_CA_prokaryotic_like 35..257 CDD:239398 63/270 (23%)

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