DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and ca15b

DIOPT Version :9

Sequence 1:NP_001245593.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_005169499.1 Gene:ca15b / 791844 ZFINID:ZDB-GENE-040426-2222 Length:320 Species:Danio rerio


Alignment Length:296 Identity:84/296 - (28%)
Similarity:128/296 - (43%) Gaps:51/296 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 ISGPAFWGLINPE-----WSL-----CNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRISGLIT- 88
            :||...|...:|.     |.:     || |.:|||:|:....:..:.||.......:..|..:| 
Zfish    20 VSGSISWCYHSPSCSEVTWPIIAEKHCN-GTQQSPINIVTANVKANANLTSFTYVGYNDSTALTV 83

  Fly    89 --NTGHSVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQF-GSEHSVEGYTF 150
              |||.|:..|..          ...:.::||.|..|:...|.|:|:|..... ||||:|.|..|
Zfish    84 IKNTGTSIQVTLD----------PKKMRVAGGNLPGRFASTEFHLHWGNGSAMPGSEHTVNGKRF 138

  Fly   151 PAEIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSN-----AELRMLTDQLERIRYGGDE 210
            |.|:.|.   ::..:|.||:|    .::||.|     :.||     ...:.||..|.||...||:
Zfish   139 PMELHIV---NKPVSNTSDSL----AVLGVFI-----EASNETGKPESWKTLTSYLTRIVKAGDK 191

  Fly   211 A-FVKRLSIRGLLPDTDH--YMTYDGSTTAPACHETVTWVVLNKPIYITKQ--QLHALRRLMQGS 270
            | ..:..|:..||...|.  |..|.||.|.|.|:|.|.|.|...||.:::.  .|.:....:..|
Zfish   192 ASLFRNFSMDDLLSGVDRTKYYRYLGSLTTPNCNEGVIWTVFKDPIRVSRDLIDLFSTTVYINNS 256

  Fly   271 PDHPKAPLGNNYRPPQPLLHRPIRTNIDFKTTKSNG 306
            .:.|.  :.|.:|..||:..|.:.:.:  ..||:.|
Zfish   257 SNSPL--MTNIFRSVQPVNGRIVMSQV--AGTKTPG 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_001245593.1 alpha_CARP_X_XI_like 37..298 CDD:239395 80/284 (28%)
ca15bXP_005169499.1 alpha_CA_IV_XV_like 48..279 CDD:239391 74/254 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579180
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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