DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and ca13.2

DIOPT Version :10

Sequence 1:NP_572581.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001072785.1 Gene:ca13.2 / 780246 XenbaseID:XB-GENE-29208903 Length:258 Species:Xenopus tropicalis


Alignment Length:260 Identity:78/260 - (30%)
Similarity:136/260 - (52%) Gaps:23/260 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 QSPVNLEPQRLLFDPNLRPMHID-KHRISGLITNTGHSVIFTAGNDTVANYDGMQTPVNISGGPL 120
            |||:|:..:...::|:|:|:... ..:.:..|.|.||  .|.      ..::.:.....:|.|||
 Frog    16 QSPININTRTAKYNPSLKPLKFSYDPKTAKRIVNVGH--CFN------VEFEDICDKSVLSEGPL 72

  Fly   121 SYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQIFGYNSQLYANFSDALNRAQGIVGVSILLQ 185
            ...||..:.|.|:|.:|:.||||:::|:.:|||:.|..:||:.|.:|::|.....|:..|.:.|:
 Frog    73 DGHYRLCQFHFHWGSSDRDGSEHNIDGHLYPAELHIVHWNSKKYTSFAEAAKHPDGVAVVGVFLK 137

  Fly   186 LGDLSNAELRMLTDQLERIRYGGDEAFVKRLSIRGLLPDTDHYMTYDGSTTAPACHETVTWVVLN 250
            ||: :|..|:.:.:.|::::..|.........:.||||:..:|.||.||.|.....|.|||::|.
 Frog   138 LGN-TNPALQSIIENLDKVKTKGKACPFTEFHLNGLLPEDLNYWTYMGSLTTKPYFECVTWIILQ 201

  Fly   251 KPIYITKQQLHALRRLMQGSPDHPKAPLGNNYRPPQPLLHRPIRTNIDFKTTKSNGKAACPTMYR 315
            :.|.::.|||...|||...|.:...:.:..|:||.|||.||.:             .::||..::
 Frog   202 EAITVSSQQLEQFRRLQCTSENENPSFILENHRPVQPLDHRVV-------------YSSCPVKHK 253

  Fly   316  315
             Frog   254  253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_572581.1 alpha_CARP_X_XI_like 37..298 CDD:239395 76/241 (32%)
ca13.2NP_001072785.1 alpha_CA 16..247 CDD:469577 76/252 (30%)

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