DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and ca15c

DIOPT Version :9

Sequence 1:NP_001245593.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001070801.1 Gene:ca15c / 768190 ZFINID:ZDB-GENE-061013-737 Length:324 Species:Danio rerio


Alignment Length:318 Identity:83/318 - (26%)
Similarity:133/318 - (41%) Gaps:34/318 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLLLLARMQVLLAVSWED------WWTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLF 69
            :..|||.:..||..|...      |...|.......|..:.|..  || |..|||:|:...::..
Zfish     2 IAFLLAFLAALLCESVHSEGSSVAWCYNDPACNFTTWPELAPHH--CN-GSSQSPINIVTAQVQE 63

  Fly    70 DPNLRPMHIDKHRISGLITNTGHSVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYG 134
            :|||     .:..::|...||..:.|..||...|.|.|  ...:::.||.|...|.....|:|:|
Zfish    64 NPNL-----TQFNLTGFDANTTFTSITNAGVSVVVNLD--DKIMSVQGGDLPGLYVSKNFHLHWG 121

  Fly   135 LNDQF-GSEHSVEGYTFPAEIQIFGYNSQLYANFSDAL----NRAQGIVGVSILLQLGDLSNAE- 193
            ..... ||||:|.|..:..|:.|...:|:...:.|.||    :.|..::|  ..::..|.:|.. 
Zfish   122 SGSSLPGSEHTVNGKQYAMELHIVNVHSKYNGSVSVALAAHDSSALAVLG--FFIEGTDEANKTK 184

  Fly   194 -LRMLTDQLERIRYGGDEA--FVKRLSIRGLLPDTD--HYMTYDGSTTAPACHETVTWVVLNKPI 253
             ..:||..|.:|....|..  .:.::::..||...|  .|..|.||.|.|.|:|.|.|.|..:||
Zfish   185 GWDVLTSFLTKIPNKNDTTVDIMNQITMNSLLEGVDKTKYYRYQGSLTTPDCNEAVIWTVFKEPI 249

  Fly   254 YITKQQLHALRRLMQGSPDHPKAPLGNNYRPPQPLLHRPIRTNIDFKTTKSNGKAACP 311
            .::...::.....:..........:.||:|..|||..|.:.:.::     ..|.:|.|
Zfish   250 KVSNNLINRFSTTVFTKTTSAPVLIFNNFRGVQPLNGRVVTSQVE-----QTGSSAAP 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_001245593.1 alpha_CARP_X_XI_like 37..298 CDD:239395 72/271 (27%)
ca15cNP_001070801.1 alpha_CA_IV_XV_like 48..291 CDD:239391 68/251 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579178
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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