DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and zgc:153760

DIOPT Version :9

Sequence 1:NP_001245593.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001070086.1 Gene:zgc:153760 / 767680 ZFINID:ZDB-GENE-060929-528 Length:324 Species:Danio rerio


Alignment Length:298 Identity:78/298 - (26%)
Similarity:133/298 - (44%) Gaps:33/298 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WTYDGISGPAF----WGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRISGLITNT 90
            |.|   :.||.    |..|.|::  || |..|||:::...::..:|||     .:..::|...||
Zfish    26 WCY---NNPACNFPNWPNIAPQY--CN-GSSQSPIDIVTAQVQGNPNL-----TQFILTGFDANT 79

  Fly    91 GHSVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQF-GSEHSVEGYTFPAEI 154
            ..:.|..:|...|.:.|  :..:::.||.|...|...:.|:|:|.:... ||||:|:|..:..|:
Zfish    80 TFTSITNSGTSVVVSLD--EDIMSVQGGDLPGLYVSVQFHLHWGSSSSLPGSEHTVDGKQYAMEL 142

  Fly   155 QIFGYNSQLYANFSDAL----NRAQGIVGVSIL-LQLGDLSNAELRMLTDQLERIRYGGD--EAF 212
            .|...:|....|.|.||    :.|..::|..|. ....|.:|: ..:.|..|..|...|:  ...
Zfish   143 HIVNLHSTYNGNVSAALAANDSSALAVLGFFIEGTDEADKTNS-WDVFTSFLSNIPNSGNTYTDI 206

  Fly   213 VKRLSIRGLLPDTD--HYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPK 275
            :.::::..||...:  .|..|.||.|.|.|:|.|.|.|..:||.:....::.....:........
Zfish   207 MDQITMNSLLEGVNKTKYYRYQGSLTTPPCNEDVIWTVFKEPIKVNNNLINRFCTKVFAKTAKAS 271

  Fly   276 APLGNNYRPPQPLLHRPIRTNIDFKTTKSNGKAACPTM 313
            ....||:|..|||..|.:.:.:: :|..|    |.|::
Zfish   272 DLNVNNFRGVQPLNGRVVTSQVE-QTVSS----AAPSL 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_001245593.1 alpha_CARP_X_XI_like 37..298 CDD:239395 72/274 (26%)
zgc:153760NP_001070086.1 alpha_CA_IV_XV_like 48..291 CDD:239391 65/250 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579181
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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