DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CARPB and Car12

DIOPT Version :10

Sequence 1:NP_572581.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_006511611.1 Gene:Car12 / 76459 MGIID:1923709 Length:355 Species:Mus musculus


Alignment Length:291 Identity:90/291 - (30%)
Similarity:147/291 - (50%) Gaps:25/291 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LQALCCTLLLLLARMQVLLAVSWEDWWTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLL 68
            |:|....||::|.:.....|......|||.|.:|...|   :.::..|. |..|||::|....|.
Mouse     6 LRATVVLLLVILKKQPSSSAPLNGSKWTYVGPAGEKNW---SKKYPSCG-GLLQSPIDLHSDILQ 66

  Fly    69 FDPNLRPMHIDKHRISG----LITNTGHSVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEI 129
            :|.:|.|:....:.:|.    .:||.||||.....:|..  ..|:|          .:.||..::
Mouse    67 YDASLAPLQFQGYNVSVEKLLNLTNDGHSVRLNLNSDMY--IQGLQ----------PHHYRAEQL 119

  Fly   130 HMHYG-LNDQFGSEHSVEGYTFPAEIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAE 193
            |:|:| .||..||||:|.|..|.||:.|..|||.||.:||.|.::::|:..:::|:::|. :|..
Mouse   120 HLHWGNRNDPHGSEHTVSGKHFAAELHIVHYNSDLYPDFSTASDKSEGLAVLAVLIEIGS-ANPS 183

  Fly   194 LRMLTDQLERIRYGGDEAFVKRLSIRGLLPDT-DHYMTYDGSTTAPACHETVTWVVLNKPIYITK 257
            ...:...|:.::|.|.:..:...:|..|||:: ..|..|:||.|.|.|:.||.|.|...|:.|::
Mouse   184 YDKIFSHLQHVKYKGQQVLIPGFNIEELLPESPGEYYRYEGSLTTPPCYPTVLWTVFRNPVQISQ 248

  Fly   258 QQLHALRRLMQGS--PDHPKAPLGNNYRPPQ 286
            :||.||...:..:  .|.....:.||:|..|
Mouse   249 EQLLALETALYFTHMDDPTPREMINNFRQVQ 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_572581.1 alpha_CARP_X_XI_like 37..298 CDD:239395 80/258 (31%)
Car12XP_006511611.1 alpha_CA 39..290 CDD:469577 80/258 (31%)

Return to query results.
Submit another query.