DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and Car10

DIOPT Version :9

Sequence 1:NP_001245593.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001348636.1 Gene:Car10 / 72605 MGIID:1919855 Length:328 Species:Mus musculus


Alignment Length:331 Identity:132/331 - (39%)
Similarity:191/331 - (57%) Gaps:30/331 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLLLLARMQVLLAVS------WEDWWTY-DGISG-----PAFWGLINPEWSLCNKGRRQSPVNLE 63
            |.||.|...|.::..      .|.||.| :.:.|     |:||||:|..|:||:.|:||||||:|
Mouse     8 LFLLQANFIVCISAQQNSPKIHEGWWAYKEVVQGSFVPVPSFWGLVNSAWNLCSVGKRQSPVNIE 72

  Fly    64 PQRLLFDPNLRPMHIDK--HRISGLITNTGHSVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRF 126
            ...::|||.|.|:.|:.  .::||.:.|||..|......:.:         |||||||::|.:|.
Mouse    73 TSHMIFDPFLTPLRINTGGRKVSGTMYNTGRHVSLRLDKEHL---------VNISGGPMTYSHRL 128

  Fly   127 HEIHMHYGLNDQFGSEHSVEGYTFPAEIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSN 191
            .||.:|:|..|..||||.:.|..|..|:|:..||.:||.|.::|.....|:|.|||.:::.|.||
Mouse   129 EEIRLHFGSEDSQGSEHLLNGQAFSGEVQLIHYNHELYTNVTEAAKSPNGLVVVSIFIKVSDSSN 193

  Fly   192 AEL-RMLT-DQLERIRYGGDEAFVKRLSIRGLLPDTDHYMTYDGSTTAPACHETVTWVVLNKPIY 254
            ..| |||. |.:.||.|..|...::.|:|..|.|:|..::|||||.|.|.|:||.:|:::|||:|
Mouse   194 PFLNRMLNRDTITRITYKNDAYLLQGLNIEELYPETSSFITYDGSMTIPPCYETASWIIMNKPVY 258

  Fly   255 ITKQQLHALRRLMQGSPDHPKAPLGNNYRPPQPLLHRPIRTNIDFKTTKSNGKAACP-TMYREVY 318
            ||:.|:|:||.|.|..|......:.:|:||.|||.:|.|||||:|..   .|| .|| ...:::.
Mouse   259 ITRMQMHSLRLLSQNQPSQIFLSMSDNFRPVQPLNNRCIRTNINFSL---QGK-DCPNNRAQKLQ 319

  Fly   319 YKATSW 324
            |:...|
Mouse   320 YRVNEW 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_001245593.1 alpha_CARP_X_XI_like 37..298 CDD:239395 115/269 (43%)
Car10NP_001348636.1 alpha_CARP_X_XI_like 46..302 CDD:239395 114/264 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835841
Domainoid 1 1.000 234 1.000 Domainoid score I2378
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H23201
Inparanoid 1 1.050 248 1.000 Inparanoid score I3228
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45680
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0002299
OrthoInspector 1 1.000 - - mtm8832
orthoMCL 1 0.900 - - OOG6_106561
Panther 1 1.100 - - LDO PTHR18952
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8915
SonicParanoid 1 1.000 - - X1354
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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