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Protein Alignment CARPB and Car13

DIOPT Version :9

Sequence 1:	NP_001245593.1	Gene:	CARPB / 31915	FlyBaseID:	FBgn0052698	Length:	327	Species:	Drosophila melanogaster
Sequence 2:	NP_078771.1	Gene:	Car13 / 71934	MGIID:	1931322	Length:	262	Species:	Mus musculus

Alignment Length:	268	Identity:	92/268 - (34%)
Similarity:	145/268 - (54%)	Gaps:	14/268 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly    30 WTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRISG-LITNTGHS 93
            |.|...:||..|..:.|    ...|.:|||:.::.:.:.:|.:|||:.|.....|. :|:|:|||
Mouse     6 WGYGEHNGPIHWNELFP----IADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPASAKIISNSGHS 66

  Fly    94 VIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQIFG 158
              |.      .::|..:....:.||||:..||..:.|:|:|..|..||||.|:|..:.||:.:..
Mouse    67 --FN------VDFDDTEDKSVLRGGPLTGNYRLRQFHLHWGSADDHGSEHVVDGVRYAAELHVVH 123

  Fly   159 YNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVKRLSIRGLLP 223
            :||..|.:|.:|.:.:.|:..:.:.||:|: .|.:|:.:||.|:.|:..|.:..........|||
Mouse   124 WNSDKYPSFVEAAHESDGLAVLGVFLQIGE-HNPQLQKITDILDSIKEKGKQTRFTNFDPLCLLP 187

  Fly   224 DTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAPLGNNYRPPQPL 288
            .:..|.||.||.|.|...|:|||:||.:||.|:.|||...|.|:..:.....|.|.:|:||||||
Mouse   188 SSWDYWTYPGSLTVPPLLESVTWIVLKQPISISSQQLARFRSLLCTAEGESAAFLLSNHRPPQPL 252

  Fly   289 LHRPIRTN 296
            ..|.:|.:
Mouse   253 KGRRVRAS 260

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.