DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and ca10a

DIOPT Version :9

Sequence 1:NP_001245593.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001032198.1 Gene:ca10a / 641327 ZFINID:ZDB-GENE-051030-123 Length:328 Species:Danio rerio


Alignment Length:309 Identity:123/309 - (39%)
Similarity:183/309 - (59%) Gaps:24/309 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 EDWWTY-DGISG-----PAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHIDK--HRI 83
            |.||.| :.:.|     |:||||:|..|:||:.|:||||||:|...::|||.|.|:.::.  .::
Zfish    30 EGWWAYKEVVQGSFVPVPSFWGLVNSAWNLCSVGKRQSPVNIETSHMIFDPFLTPLRLNTGGRKV 94

  Fly    84 SGLITNTGHSVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGY 148
            .|.:.|||..|......:.:         |||||||::|.:|..||.:|:|..|..||||.:.|.
Zfish    95 GGTMYNTGRHVSLRLDKEHL---------VNISGGPMTYSHRLEEIRLHFGSEDGQGSEHLLNGQ 150

  Fly   149 TFPAEIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAEL-RMLT-DQLERIRYGGDEA 211
            .|..|:|:..||.:||.|:::|.....|:|.|||.:::.:.||:.| |||. |.:.||.|..|..
Zfish   151 AFSGEVQLIHYNHELYTNYTEAAKSPNGLVIVSIFMKISETSNSFLNRMLNRDTITRITYKNDAY 215

  Fly   212 FVKRLSIRGLLPDTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKA 276
            .:..|:|..:.|:|..::||:||.|.|.|:||.||:::|||||:||.|:|::|.|.|..|.....
Zfish   216 LLSGLNIEEVYPETASFITYEGSMTIPPCYETATWILMNKPIYVTKMQMHSMRLLSQNQPSQIFL 280

  Fly   277 PLGNNYRPPQPLLHRPIRTNIDFKTTKSNGKAACP-TMYREVYYKATSW 324
            .:.:|.||.|||.:|.|||||:|   ...|| .|| ...:::.|:...|
Zfish   281 SMSDNVRPVQPLNNRCIRTNINF---SMQGK-DCPNNRAQKLQYRVNEW 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_001245593.1 alpha_CARP_X_XI_like 37..298 CDD:239395 111/269 (41%)
ca10aNP_001032198.1 alpha_CARP_X_XI_like 46..302 CDD:239395 110/264 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579205
Domainoid 1 1.000 233 1.000 Domainoid score I2331
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H23201
Inparanoid 1 1.050 248 1.000 Inparanoid score I3235
OMA 1 1.010 - - QHG45680
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0002299
OrthoInspector 1 1.000 - - mtm6345
orthoMCL 1 0.900 - - OOG6_106561
Panther 1 1.100 - - LDO PTHR18952
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8915
SonicParanoid 1 1.000 - - X1354
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1615.840

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