DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and PTPRG

DIOPT Version :9

Sequence 1:NP_001245593.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_016862450.1 Gene:PTPRG / 5793 HGNCID:9671 Length:1485 Species:Homo sapiens


Alignment Length:318 Identity:82/318 - (25%)
Similarity:126/318 - (39%) Gaps:64/318 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SWEDWWTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHID----KHRISG 85
            |.:.:|.|.|..||..|    ...|:...||.|||:::..|........:.:.:|    :.....
Human    55 SGDPYWAYSGAYGPEHW----VTSSVSCGGRHQSPIDILDQYARVGEEYQELQLDGFDNESSNKT 115

  Fly    86 LITNTGHSVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYG-LNDQFGSEHSVEGYT 149
            .:.|||.:|.....:|..           :||..|..|::..::..|:| .|...|||||:.|..
Human   116 WMKNTGKTVAILLKDDYF-----------VSGAGLPGRFKAEKVEFHWGHSNGSAGSEHSINGRR 169

  Fly   150 FPAE----------------------------------------IQIFGYNSQLYANFSDALNRA 174
            ||.|                                        :|||.||...:.:|..|::..
Human   170 FPVEAEDARGGDIMLMLSQGMRFILLGLKKEQFEERKSWTTYQSMQIFFYNPDDFDSFQTAISEN 234

  Fly   175 QGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVKRLSIRGLLP-DTDHYMTYDGSTTAP 238
            :.|..::|..|:....|:.|..:...|:.:.:...|.|:....:|.||| ....|..|.||.|.|
Human   235 RIIGAMAIFFQVSPRDNSALDPIIHGLKGVVHHEKETFLDPFVLRDLLPASLGSYYRYTGSLTTP 299

  Fly   239 ACHETVTWVVLNKPIYITKQQLHALRRLM-QGSPDHPKAP--LGNNYRPPQPLLHRPI 293
            .|.|.|.|:|..:|:.|:..||.|...:. ....||.|:.  |.||:||.|.|..|.:
Human   300 PCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYLRNNFRPQQRLHDRVV 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_001245593.1 alpha_CARP_X_XI_like 37..298 CDD:239395 78/306 (25%)
PTPRGXP_016862450.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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