DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and ca14

DIOPT Version :9

Sequence 1:NP_001245593.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001315073.1 Gene:ca14 / 567897 ZFINID:ZDB-GENE-051030-57 Length:373 Species:Danio rerio


Alignment Length:273 Identity:89/273 - (32%)
Similarity:140/273 - (51%) Gaps:26/273 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRISG----LITNT 90
            |||.|..|...|....||   |. |..|||||::..:.|.||.|.|:....:...|    :::|.
Zfish    26 WTYTGAVGQPEWIEFFPE---CG-GFNQSPVNVDTSQTLHDPTLIPVQPMGYNQPGRRPFILSNN 86

  Fly    91 GHSVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHY--GLNDQFGSEHSVEGYTFPAE 153
            ||:|     ..|:.::.|:        |.|...|...::|:|:  |:....||||::.|.:..||
Zfish    87 GHTV-----QMTLPHWMGV--------GGLPSHYSAVQLHLHWGNGVGIATGSEHTINGQSTSAE 138

  Fly   154 IQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVKRLSI 218
            :.|..||:::|||.|:|:.:..|:..:.||::.|:..|.....:.:.|.||||.|.:..:....:
Zfish   139 LHIVHYNTEVYANLSEAMMQKNGLAVLGILIETGEEVNQAYGSIFNYLGRIRYAGQKVAIPSFDL 203

  Fly   219 RGLLPDT-DHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAP--LGN 280
            :.|||:. ..|..|:||.|.|.|||:|.|.:.|:.:.|:..||..|..::..|....:.|  |.:
Zfish   204 QSLLPENLSQYFRYNGSLTTPPCHESVLWTIFNERVKISHSQLLKLETVLYSSKAEEEEPTILQD 268

  Fly   281 NYRPPQPLLHRPI 293
            |||..|||.||.:
Zfish   269 NYRATQPLNHRTV 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_001245593.1 alpha_CARP_X_XI_like 37..298 CDD:239395 85/266 (32%)
ca14NP_001315073.1 alpha_CA 33..285 CDD:294017 85/266 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579144
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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