DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and ca15a

DIOPT Version :9

Sequence 1:NP_001245593.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001075158.1 Gene:ca15a / 553469 ZFINID:ZDB-GENE-070424-7 Length:324 Species:Danio rerio


Alignment Length:295 Identity:78/295 - (26%)
Similarity:134/295 - (45%) Gaps:32/295 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WTYDG-ISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRISGLITNTGHS 93
            |.|:. :.....|..::|.:  || |..|||:|:...::|.:.||     .:...:|...||...
Zfish    26 WCYNNPLCNFTTWPELSPHY--CN-GSSQSPINIVTAQVLENSNL-----TQFNFTGFDANTTFI 82

  Fly    94 VIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQF-GSEHSVEGYTFPAEIQIF 157
            .:..:|...|...|  :..:::.||.|...|...:.|:|:|.:..| ||||:|:|..:..|:.|.
Zfish    83 SMANSGISVVVTLD--EEIMSVQGGDLPGLYVSKQFHLHWGNSSSFPGSEHTVDGKQYAMELHIV 145

  Fly   158 GYNSQLYANFSDAL--NRAQGIVGVSILLQ-LGDLSNAE-LRMLTDQLERIRYGGDEA--FVKRL 216
            ..:|:...:.|.||  |.:..:..:...:: ..:.|.|: ..:||..|..|.|.|:..  .:.|.
Zfish   146 NVHSKYNGSLSAALAANDSSALAVLGFFIEGTNEASKAKGWGVLTSFLRNITYSGNATVDIMNRT 210

  Fly   217 SIRGLLPDTD--HYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAPL- 278
            |:..||...:  .|..|.||.|.|:|:|.|.|.|..:||.:....::.....:...  :..||: 
Zfish   211 SMNSLLEGVNKTKYYRYRGSLTTPSCNEAVIWTVFKEPIKVNNNLINLFSTTVFAK--NASAPVL 273

  Fly   279 -GNNYRPPQPLLHRPIRTNIDFKTTKSNGKAACPT 312
             .||:|..|||..|.:.:.::        :.|.||
Zfish   274 NVNNFRGVQPLNGRVVTSQVE--------QTASPT 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_001245593.1 alpha_CARP_X_XI_like 37..298 CDD:239395 73/271 (27%)
ca15aNP_001075158.1 alpha_CA_IV_XV_like 48..291 CDD:239391 69/251 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579179
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.750

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