DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and ca2

DIOPT Version :9

Sequence 1:NP_001245593.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001015729.1 Gene:ca2 / 548446 XenbaseID:XB-GENE-484348 Length:260 Species:Xenopus tropicalis


Alignment Length:269 Identity:86/269 - (31%)
Similarity:139/269 - (51%) Gaps:17/269 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHIDKH--RISGLITNTGH 92
            |.|...:|||.|....|    ...|..|||:|:......:|.:|:|:.| |:  ..:.:|.|.||
 Frog     5 WGYGPDNGPATWHHAFP----IAHGDHQSPINIVSAEAKYDHHLKPISI-KYDPSTAKVILNNGH 64

  Fly    93 SVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQIF 157
                 |.|   ..:|..:....:|||.:|:.||..:.|.|:|..|..||||:|:|..:.||:.:.
 Frog    65 -----AFN---VEFDDSEDKSVLSGGAVSHPYRLKQFHFHWGSCDGHGSEHTVDGVKYEAELHLV 121

  Fly   158 GYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVKRLSIRGLL 222
            .:|:: ||:.::|:....|:..|.:.|::|: ::..|:.:.|.|:.|...|:||.........||
 Frog   122 HWNTK-YASMAEAVKHCDGLAVVGVFLKVGE-AHPGLQKVLDALKLIPNKGNEAPFTDYDPSVLL 184

  Fly   223 PDTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAPLGNNYRPPQP 287
            |::..:..|.||.|.|...:.|.|.||.:||.::.|||..||.|...:.......:.:|:|||||
 Frog   185 PNSLDFWNYKGSLTTPPLLQCVLWHVLREPIAVSNQQLSQLRSLFFNAEGDTPCCMVDNFRPPQP 249

  Fly   288 LLHRPIRTN 296
            |..|.:|.:
 Frog   250 LKSRHVRAS 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_001245593.1 alpha_CARP_X_XI_like 37..298 CDD:239395 84/262 (32%)
ca2NP_001015729.1 alpha_CA 1..259 CDD:381753 86/269 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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