Protein Alignment CARPB and Ca5a

DIOPT Version :10

• Sequence 1: NP_572581.1
• Gene: CARPB / 31915
• FlyBaseID: FBgn0052698
• Length: 327
• Species: Drosophila melanogaster
• Sequence 2: NP_062166.1
• Gene: Ca5a / 54233
• RGDID: 2243
• Length: 304
• Species: Rattus norvegicus
• Alignment Length: 314
• Identity: 95/314 - (30%)
• Similarity: 139/314 - (44%)
• Gaps: 45/314 - (14%)

  Fly    12 LLLLARMQVLLAVSWEDW------------------WTYDGISGPAFWGLINPEWSLCNKGRRQS 58
            |.:|..|..|.|...:.|                  || ..:|.|.              |.:||
  Rat    15 LAILRHMGPLCATRPQHWRFQHSYAEKHSNCARHPLWT-GPVSSPG--------------GTQQS 64

  Fly    59 PVNLEPQRLLFDPNLRPMHIDKHRIS-GLITNTGHSVIFTAGNDTVANYDGMQTPVNISGGPLSY 122
            |:|::....::||.|.|:.:.....| ..:.|||:  .|....|......|      ||||||..
  Rat    65 PINIQWTDSVYDPKLAPLRVSYDAASCRYLWNTGY--FFQVEFDDSCEESG------ISGGPLGN 121

  Fly   123 RYRFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLG 187
            .||..:.|.|:|..|::||||.|:|:.:|||:.:..:||..|.|:..|.....|:..:.:.|:||
  Rat   122 HYRLKQFHFHWGATDEWGSEHMVDGHAYPAELHLVHWNSMKYENYKKATTGENGLAVIGVFLKLG 186

  Fly   188 DLSNAELRMLTDQLERIRYGGDEAFVKRLSIRGLLPDTDHYMTYDGSTTAPACHETVTWVVLNKP 252
            ....| |:.|.|.|..:|:...:..:.......|||....|.||.||.|.|...|:|||:|...|
  Rat   187 AHHEA-LQRLVDILPEVRHKDTQVTMGPFDPSCLLPACRDYWTYPGSLTTPPLAESVTWIVHKMP 250

  Fly   253 IYITKQQLHALRRLMQGSPDHPKAPLGNNYRPPQPLLHRPIRTNIDFKT--TKS 304
            |.::..||...|.|:.......:..:.||:||.|||..|.:|::.....  |||
  Rat   251 IEVSPSQLSTFRTLLFSGRGEDEEVMVNNFRPLQPLRGRNVRSSFQVPRVGTKS 304

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CARPB	NP_572581.1	alpha_CARP_X_XI_like	37..298	CDD:239395	83/261 (32%)
Ca5a	NP_062166.1	alpha_CA	60..295	CDD:469577	82/243 (34%)