DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CARPB and CAH9

DIOPT Version :10

Sequence 1:NP_572581.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_651535.1 Gene:CAH9 / 43264 FlyBaseID:FBgn0039486 Length:311 Species:Drosophila melanogaster


Alignment Length:323 Identity:84/323 - (26%)
Similarity:123/323 - (38%) Gaps:45/323 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LAVSWEDWWTYDGISGPAFWGLINP---EWSL----CNKGRRQSPVNLEPQR----------LLF 69
            |.:.|.     ..:|...| |...|   .|:.    | .|:.|||:.:...|          ::.
  Fly    12 LLICWS-----QAVSSHVF-GYSEPNQRRWARHHGHC-AGKTQSPIAITTSRTTAIHMPAVDMIG 69

  Fly    70 DPNLRPMHIDKHRISGLITNTGHSVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYG 134
            ..||.|..:.       :.|.||:|..|.....|........|. |.|..|...:....:|.|:|
  Fly    70 YHNLLPYPLK-------MINNGHTVSITIPKVNVTEVGEDFLPY-IRGAKLPGEFEVEGLHFHWG 126

  Fly   135 LNDQFGSEHSVEGYTFPAEIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTD 199
            ..:..||||.:....:..|:.|...|.: ||...:|||...|...:.....|.:...|.|..:..
  Fly   127 DKNNRGSEHVINDIRYTMEMHIVHRNKK-YATIGEALNHPDGAAVLGFFFNLDEDEGAGLVTINR 190

  Fly   200 QLERIRYGGDEAFVK-RLSIRGLLP--DTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLH 261
            .|..|.....||.:. ..|:..|:.  |.|.:.||.||.|.|.|.|.|||::...||.|:.:|:.
  Fly   191 HLHLIADANQEATLNVTFSLSSLIAGVDVDKFYTYKGSLTTPPCSEAVTWILFPDPIPISPKQIS 255

  Fly   262 ALRRLMQGSPDHPKAPLGNNYRPPQPLLHRPIRTNIDFKTTKSNGKAACPTMYREVYYKATSW 324
            ..|:|    .|.....|.:|:|..||:.:|.|     |..|......:..|:..|..|....|
  Fly   256 RFRQL----SDTQDGALVDNFRTLQPVGNRRI-----FARTGHVRHTSIATLKHEGEYLKYDW 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_572581.1 alpha_CARP_X_XI_like 37..298 CDD:239395 75/280 (27%)
CAH9NP_651535.1 Carb_anhydrase 31..286 CDD:459707 73/273 (27%)

Return to query results.
Submit another query.