Protein Alignment CARPB and Ca8

DIOPT Version :10

• Sequence 1: NP_572581.1
• Gene: CARPB / 31915
• FlyBaseID: FBgn0052698
• Length: 327
• Species: Drosophila melanogaster
• Sequence 2: NP_001009662.1
• Gene: Ca8 / 297814
• RGDID: 1304709
• Length: 290
• Species: Rattus norvegicus
• Alignment Length: 283
• Identity: 86/283 - (30%)
• Similarity: 141/283 - (49%)
• Gaps: 40/283 - (14%)

  Fly    28 DWWTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRI---SGLITN 89
            :|...:|:.    |||:.|:    ..|..|||:||..:...:||:|..:.:..:.:   ...:||
  Rat    28 EWGYEEGVE----WGLVFPD----ANGEYQSPINLNSREARYDPSLLDVRLSPNYVVCRDCEVTN 84

  Fly    90 TGHSVIFTAGNDTVANYDGMQTPVNISGGPL--SYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPA 152
            .||::.....:.:|           :|||||  ...:..:|:..|:|..:|.||||:|....||.
  Rat    85 DGHTIQVILKSKSV-----------LSGGPLPQGQEFELYEVRFHWGRENQRGSEHTVNFKAFPM 138

  Fly   153 EIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVKRLS 217
            |:.:..:||.|:.:..:|:.:..|||.:::.:|:|. .:..|:.:|:.|:.|:|.|....:...:
  Rat   139 ELHLIHWNSTLFGSIDEAVGKPHGIVIIALFVQIGK-EHVGLKAVTEILQDIQYKGKSKTIPCFN 202

  Fly   218 IRGLLPD--TDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAP--- 277
            ...||||  ...|..|:||.|.|.|.|.|||::...|:.|::.|:...|||.    .|.|..
  Rat   203 PNTLLPDPLLRDYWVYEGSLTIPPCSEGVTWILFRYPLTISQLQIEEFRRLR----THVKGAELV 263

  Fly   278 ------LGNNYRPPQPLLHRPIR 294
                  ||:|:||.|||..|.||
  Rat   264 EGCDGILGDNFRPTQPLSDRVIR 286

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CARPB	NP_572581.1	alpha_CARP_X_XI_like	37..298	CDD:239395	84/274 (31%)
Ca8	NP_001009662.1	alpha_CARP_VIII	35..289	CDD:239394	84/276 (30%)