DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and Car7

DIOPT Version :10

Sequence 1:NP_572581.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001099635.1 Gene:Car7 / 291819 RGDID:1306842 Length:264 Species:Rattus norvegicus


Alignment Length:270 Identity:93/270 - (34%)
Similarity:146/270 - (54%) Gaps:18/270 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRISGL-ITNTGHS 93
            |.|....||:.|..:.|    ..:|.||||:|:...:.::.|:|:|:.:.......| |||.|||
  Rat     7 WGYGQDDGPSNWHKLYP----IAQGDRQSPINIISSQAVYSPSLQPLELFYEACMSLSITNNGHS 67

  Fly    94 --VIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQI 156
              |.|...:|...          ::||||...||..::|.|:|.....||||:|:|.:||:|:.:
  Rat    68 VQVDFNDSDDRTV----------VAGGPLEGPYRLKQLHFHWGKKRDVGSEHTVDGKSFPSELHL 122

  Fly   157 FGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVKRLSIRGL 221
            ..:|::.|:.|.:|.....|:..|.|.|:.|| .:..:..|||.|..:|:...:|.....:.:.|
  Rat   123 VHWNAKKYSTFGEAAAAPDGLAVVGIFLETGD-EHPSMNRLTDALYMVRFKDTKAQFSCFNPKCL 186

  Fly   222 LPDTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAPLGNNYRPPQ 286
            ||.:.||.||.||.|.|...|:|||:||.:||.|:::|:...|.|:..|.|..:..:.||:||||
  Rat   187 LPTSRHYWTYPGSLTTPPLSESVTWIVLREPIRISERQMEKFRSLLFTSEDDERIHMVNNFRPPQ 251

  Fly   287 PLLHRPIRTN 296
            ||..|.::.:
  Rat   252 PLKGRVVKAS 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_572581.1 alpha_CARP_X_XI_like 37..298 CDD:239395 91/263 (35%)
Car7NP_001099635.1 alpha_CA_VII 27..262 CDD:239402 87/246 (35%)

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