DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and Car14

DIOPT Version :10

Sequence 1:NP_572581.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_006501505.1 Gene:Car14 / 23831 MGIID:1344341 Length:460 Species:Mus musculus


Alignment Length:286 Identity:89/286 - (31%)
Similarity:140/286 - (48%) Gaps:23/286 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLARMQVLLAVSWEDWWTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNL---RP 75
            ||.::..:||......|||:|..|...|....||   |. |..|||:|::...::|||:|   :|
Mouse     6 LLLKVTWILAADGGHHWTYEGPHGQDHWPTSYPE---CG-GDAQSPINIQTDSVIFDPDLPAVQP 66

  Fly    76 MHIDKHRISGL-ITNTGHSVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQF 139
            ...|:.....| :.|.||:|             .:..|..:..|.|..:|...::|:|:|.....
Mouse    67 HGYDQLGTEPLDLHNNGHTV-------------QLSLPPTLHLGGLPRKYTAAQLHLHWGQRGSL 118

  Fly   140 -GSEHSVEGYTFPAEIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLER 203
             ||||.:......||:.:..|:||.|::.|:|..:.||:..:.||:::|:..|.....:..:|..
Mouse   119 EGSEHQINSEATAAELHVVHYDSQSYSSLSEAAQKPQGLAVLGILIEVGETENPAYDHILSRLHE 183

  Fly   204 IRYGGDEAFVKRLSIRGLLP-DTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLM 267
            |||...:..|...|:|.|.| ..:.:..|:||.|.|.|:::|.|.|.|:...|:..||..|:..:
Mouse   184 IRYKDQKTSVPPFSVRELFPQQLEQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQLEKLQETL 248

  Fly   268 QGSPDHPKAPLGNNYRPPQPLLHRPI 293
            ..:.:.|..||..|||.||||..|.|
Mouse   249 SSTEEDPSEPLVQNYRVPQPLNQRTI 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_572581.1 alpha_CARP_X_XI_like 37..298 CDD:239395 81/263 (31%)
Car14XP_006501505.1 alpha_CA_XII_XIV 29..278 CDD:239400 81/263 (31%)

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