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Protein Alignment CARPB and Car9

DIOPT Version :9

Sequence 1:	NP_001245593.1	Gene:	CARPB / 31915	FlyBaseID:	FBgn0052698	Length:	327	Species:	Drosophila melanogaster
Sequence 2:	NP_647466.2	Gene:	Car9 / 230099	MGIID:	2447188	Length:	437	Species:	Mus musculus

Alignment Length:	272	Identity:	83/272 - (30%)
Similarity:	132/272 - (48%)	Gaps:	28/272 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly    30 WTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRISGL----ITNT 90
            |:|   .|...|..::|..:    ||.||||::..:|..|...|:|:.:..:.:..|    ::|.
Mouse   120 WSY---GGTLLWPQVSPACA----GRFQSPVDIRLERTAFCRTLQPLELLGYELQPLPELSLSNN 177

  Fly    91 GHSVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQ 155
            ||:|..|           :...:.::.|| ...||..::|:|:|.:|..||||:|.|:.|||||.
Mouse   178 GHTVQLT-----------LPPGLKMALGP-GQEYRALQLHLHWGTSDHPGSEHTVNGHRFPAEIH 230

  Fly   156 IFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVKRLSIRG 220
            :. :.|..::...:||.|..|:..::..||.....|:....|...||.|...|.:..:..|.:..
Mouse   231 VV-HLSTAFSELHEALGRPGGLAVLAAFLQESPEENSAYEQLLSHLEEISEEGSKIEIPGLDVSA 294

  Fly   221 LLP-DTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAPLGNNYRP 284
            ||| |...|..|:||.|.|.|.:.|.|.|.|:.:.::.:|||.|...:.|..|   :.|..|:|.
Mouse   295 LLPSDLSRYYRYEGSLTTPPCSQGVIWTVFNETVKLSAKQLHTLSVSLWGPRD---SRLQLNFRA 356

  Fly   285 PQPLLHRPIRTN 296
            .|||..|.|..:
Mouse   357 TQPLNGRTIEAS 368

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.