Protein Alignment CARPB and cah-6

DIOPT Version :10

• Sequence 1: NP_572581.1
• Gene: CARPB / 31915
• FlyBaseID: FBgn0052698
• Length: 327
• Species: Drosophila melanogaster
• Sequence 2: NP_491189.1
• Gene: cah-6 / 189049
• WormBaseID: WBGene00000284
• Length: 319
• Species: Caenorhabditis elegans
• Alignment Length: 270
• Identity: 70/270 - (25%)
• Similarity: 120/270 - (44%)
• Gaps: 29/270 - (10%)

  Fly    54 GRRQSPVNLEPQRLLFDPNLRPMHIDKHRISGLIT--NTGHSVIFTAGNDTVANYDGMQTPVNIS 116
            ||.|||:::.|....|..:|:..|.:       :|  :||.......||......:|..:.:.||
 Worm    65 GRTQSPIDIVPVITAFGEHLQNAHFE-------VTYESTGEFKAVNDGNSIWLMREGNSSELAIS 122

  Fly   117 GGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQIFGYNSQLYANFSDALNRAQGIVGVS 181
            ..| ..:|....::.|:......||||::.|..:..|:.:...|:: :|..:|||.:..|::.::
 Worm   123 FLP-EEQYHLDAVNFHWATEPMNGSEHTIGGVGYAGEMHLIHRNTR-FATMADALKQPNGVIAIA 185

  Fly   182 ILLQLGDLSNAELRMLTDQLERIRYGGDEAFVKRLSIRGLLP---DTDHYMTYDGSTTAPACHET 243
            :.|......||....|.:.|.::.|.|.|..:.....:...|   .|..:..|:||.|.....||
 Worm   186 VFLNESHDDNAVFSPLINLLPQVIYKGSECKLCSFDFQTFFPVAEKTKEFWMYEGSETTDPFRET 250

  Fly   244 VTWVVLNKPIYITKQQLHALRRLMQGSPDH---PKAPLGNNYRPPQPLLHRPIRTNIDFKTTKSN 305
            |.|:|:...:.|:..||..||.:..|..|.   .|.|:       :||  |||: |...:|.:|:
 Worm   251 VNWIVIRAALPISSHQLDKLREVRAGRYDEEFSDKVPM-------KPL--RPIQ-NPSSRTIQSS 305

  Fly   306 GK--AACPTM 313
            .:  |..|.:
 Worm   306 FRSVAGAPDL 315

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CARPB	NP_572581.1	alpha_CARP_X_XI_like	37..298	CDD:239395	66/251 (26%)
cah-6	NP_491189.1	alpha_CARP_receptor_like	56..304	CDD:239396	67/257 (26%)