Protein Alignment CARPB and cah-2

DIOPT Version :10

• Sequence 1: NP_572581.1
• Gene: CARPB / 31915
• FlyBaseID: FBgn0052698
• Length: 327
• Species: Drosophila melanogaster
• Sequence 2: NP_495567.3
• Gene: cah-2 / 174218
• WormBaseID: WBGene00000280
• Length: 337
• Species: Caenorhabditis elegans
• Alignment Length: 295
• Identity: 119/295 - (40%)
• Similarity: 180/295 - (61%)
• Gaps: 11/295 - (3%)

  Fly    32 YDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRISGLITNTGHSVIF 96
            |..:.||.||||::.:|.:|..|:.|||||::|.:||:||:|.|::|:.:.:..:..|||...:.
 Worm    11 YPCVIGPDFWGLLHGDWRMCTAGQMQSPVNIDPSQLLYDPHLMPINIEGNIVEAVFENTGQLPVV 75

  Fly    97 TAGNDTVANYDGMQTPVNISGGP-LSYRYRFHEIHMHYGLND--QFGSEHSVEGYTFPAEIQIFG 158
                 ||.:.....| :||:||| :.|||:.|:|.:|:|..|  :.||||:|:...||||||:..
 Worm    76 -----TVKDLPNRPT-INITGGPTMPYRYKLHQISVHFGRADEGEKGSEHTVDRVRFPAEIQLLA 134

  Fly   159 YNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVKRLSIRGLLP 223
            |||.||.|||.|:...:|::.||:::.:|..::.|||.||...:.|.|.|....:.......|||
 Worm   135 YNSALYPNFSVAMTSPRGLLAVSVIVDIGKTTSVELRRLTVASQSINYKGQTTNLTDFQPSALLP 199

  Fly   224 DTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPK-APLGNNYRPPQP 287
            .|.||:||:||.|.|.||||||||:||.|||||...|.....:.:.....|: :.:...|||.:.
 Worm   200 KTSHYVTYEGSLTFPGCHETVTWVILNNPIYITNDDLQIWNEMQKTETKQPEPSYMTPAYRPLKS 264

  Fly   288 LLHRPIRTNIDFKTTKSNGKAACPT-MYREVYYKA 321
            |..|.:||||:..:.:|...::||: :|.|:.|:|
 Worm   265 LNGRLVRTNINVGSKQSTVSSSCPSNVYVEMGYQA 299

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CARPB	NP_572581.1	alpha_CARP_X_XI_like	37..298	CDD:239395	110/264 (42%)
cah-2	NP_495567.3	alpha_CARP_X_XI_like	16..275	CDD:239395	110/264 (42%)