DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and CAH1

DIOPT Version :10

Sequence 1:NP_572581.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_061510461.1 Gene:CAH1 / 1279482 VectorBaseID:AGAMI1_001969 Length:276 Species:Anopheles gambiae


Alignment Length:291 Identity:82/291 - (28%)
Similarity:138/291 - (47%) Gaps:50/291 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRL-----LFDPNLRPMHIDKHRISGLITN 89
            |.|..::||..|    ||.....:|:|||||::...:.     |.:..||..::.::..|  :.|
Mosquito     5 WGYTQMNGPQKW----PEMFPQARGQRQSPVDIVTSKTQNSGDLQENPLRWTYVPENTRS--LVN 63

  Fly    90 TGHSVIFTAGNDTVANYDGMQTPVN-----ISGGPL-SYRYRFHEIHMHYGLNDQFGSEHSVEGY 148
            .|:.               .:..||     ::|||| ..::...:.|.|:|.:|..||||:|:|.
Mosquito    64 PGYC---------------WRVDVNGKGSMLTGGPLQKEQFILEQFHCHWGCSDSRGSEHTVDGE 113

  Fly   149 TFPAEIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFV 213
            :|..|:.:..:|...|.:|::|.....|:..:.:.|::|. .:.||.::...|..|.:.||...:
Mosquito   114 SFAGELHLVHWNQSKYKSFAEAAGHPDGLAVLGVFLKVGK-PHPELDIIARLLPFITHKGDRVTL 177

  Fly   214 -KRLSIRGLLPDTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRL----------- 266
             |.|....|||:...|.||.||.|.|.|.|:|||::..:||.::.:||...|.:           
Mosquito   178 NKPLDPARLLPEGKAYWTYLGSLTTPPCSESVTWILFKEPIEVSHEQLELFREMRCYDAAEECPC 242

  Fly   267 ---MQGSPDHPKAPLGNNYRPPQPLLHRPIR 294
               :....|:.|  :.||:|||..|.:|.:|
Mosquito   243 DETLNKQFDYGK--VINNFRPPLELGNRQLR 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_572581.1 alpha_CARP_X_XI_like 37..298 CDD:239395 80/284 (28%)
CAH1XP_061510461.1 None

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