DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CARPB and LOC1273605

DIOPT Version :10

Sequence 1:NP_572581.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_312598.5 Gene:LOC1273605 / 1273605 VectorBaseID:AGAMI1_004331 Length:376 Species:Anopheles gambiae


Alignment Length:272 Identity:90/272 - (33%)
Similarity:131/272 - (48%) Gaps:36/272 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRISG--------LITNTGH 92
            :||:.|..::   :.|. ||.|||:.|.....|.....||:.:|     |        |:.|.||
Mosquito   124 NGPSHWYRVD---ARCG-GRYQSPILLNTSSALLVNRKRPLRLD-----GQTNLPQTILLQNDGH 179

  Fly    93 SVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQIF 157
            |..||....|     |...|| :.||||..:|.|.:.|.|:|:|...||||..:...:|.||.:.
Mosquito   180 SAKFTYNWRT-----GADRPV-LRGGPLKTKYLFDQFHFHWGVNSTVGSEHVYDYQRYPMEIHLV 238

  Fly   158 GYNSQLYANFSDALNRAQGIVGVSILLQLGDLS-----NAELRMLTDQLERIRYGGDEAFVKRLS 217
            .||. ||.:|:.|..:..||..|.:..::.|.|     |...|.|.:.:|.......| |:....
Mosquito   239 FYNG-LYESFAAAREQVDGIAVVGLFYEIYDHSVDEQLNTWTRFLRNVVEPNSQHTIE-FIDTFP 301

  Fly   218 IRGLLPDTD-HYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAPLGNN 281
            :..::.|.: .|.:|:||.|.|.|.|||||:|..||:.:|::::...|||..     |...:.||
Mosquito   302 LYEVIGDVEWPYFSYEGSLTTPPCLETVTWIVATKPLLVTEKEMKQFRRLQS-----PTGLMVNN 361

  Fly   282 YRPPQPLLHRPI 293
            |||.|.|.||.:
Mosquito   362 YRPVQKLNHRRV 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_572581.1 alpha_CARP_X_XI_like 37..298 CDD:239395 90/271 (33%)
LOC1273605XP_312598.5 None

Return to query results.
Submit another query.