DRSC/TRiP Functional Genomics Resources

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Protein Alignment CARPB and LOC1273602

DIOPT Version :10

Sequence 1:NP_572581.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_312595.6 Gene:LOC1273602 / 1273602 VectorBaseID:AGAMI1_012385 Length:319 Species:Anopheles gambiae


Alignment Length:323 Identity:98/323 - (30%)
Similarity:147/323 - (45%) Gaps:59/323 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LQALCCTLLL-----LLAR--MQVLLAVSW------------------EDWWTY---DGISGPAF 40
            :.|||.:|||     :.||  .|...|.||                  :..|:|   |.: ||..
Mosquito     8 MSALCLSLLLACQPVVFARGYAQEDAAGSWHPNEVSYDETEAKGGRTSQQSWSYTLSDAL-GPPN 71

  Fly    41 WGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHID--KHRISGLIT-NTGHSVIFTAGNDT 102
            |.::.|   .|. |:.|||:|:...|.|......|:.|.  |:|.:.:.. |.|:||.||.    
Mosquito    72 WPIVAP---ACG-GQFQSPININTSRALKVNRKVPLEIVGLKNRPTYITAENEGYSVKFTP---- 128

  Fly   103 VANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQIFGYNSQLYANF 167
               ..|.:|...:.||||...|.|.::|.|:|.|:..||||.:.|..||.|:.:..||. ||.:.
Mosquito   129 ---KWGFRTRPMMRGGPLKTAYFFEQMHFHWGPNNSEGSEHRINGERFPLEVHLVFYNG-LYQSL 189

  Fly   168 SDALNRAQGIVGVSILLQL--GDLSNAELRMLTDQLERIRYGGDEAFV---KRLSIRGLLPDTD- 226
            ::|.....|:..|.....:  |. |:..|...::.|.::|..|.:..:   :..|::.::.... 
Mosquito   190 AEAAGEVDGLAVVGFFYDVVPGS-SSFSLNSWSNFLPQVRQPGAKFEISPTRSFSLQDVVGAMGW 253

  Fly   227 HYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLM--QGSPDHPKAPLGNNYRPPQP 287
            .|.:||||.|.|.|.|||.|:|.||.:..|:..:..||.|:  ||.      .:..|||.|||
Mosquito   254 SYYSYDGSLTTPPCLETVNWIVSNKRLSATELDMSRLRSLITKQGK------QMVLNYRSPQP 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_572581.1 alpha_CARP_X_XI_like 37..298 CDD:239395 83/262 (32%)
LOC1273602XP_312595.6 None

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