DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CARPB and LOC1271844

DIOPT Version :10

Sequence 1:NP_572581.1 Gene:CARPB / 31915 FlyBaseID:FBgn0052698 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_061501997.1 Gene:LOC1271844 / 1271844 VectorBaseID:AGAMI1_004713 Length:291 Species:Anopheles gambiae


Alignment Length:274 Identity:77/274 - (28%)
Similarity:117/274 - (42%) Gaps:53/274 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 NKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRISGLITNTGHSVIFTAGNDTVANYDG-MQTPVN- 114
            :||..||||.|...|.....:..|:|...| ..||    |.:.:...|...|.:::. ..:|.| 
Mosquito     6 SKGTVQSPVCLVQGRARIVDDAAPLHYVGH-WDGL----GRATLSNNGQSAVVSFENPASSPSNP 65

  Fly   115 --------------------ISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQIFGY 159
                                :.||||...|.|.::|.|:|.:|..||||.::|.....|..:..|
Mosquito    66 HLPPPFPAKLTLSERPFRPFLVGGPLGSAYLFEQLHFHWGPDDAVGSEHLLDGRAHSMEAHLVHY 130

  Fly   160 NSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQLERIRYGGDEAFVKRLSIRGLLPD 224
            |:: |.:|..||....|:..|::.|..|  .:|..|.|...:..:|:      ::|...|.....
Mosquito   131 NAR-YGSFGAALAHPDGLAVVALWLDGG--GSAVWRPLQPIVRALRH------IRRPGTRTTALP 186

  Fly   225 TD-------------HYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPK- 275
            .|             ||.|||||.|.....|.|.|::...|:|::.:|..|.|||::..|..|. 
Mosquito   187 ADCLRWLAAGLELGRHYYTYDGSMTTAPYRECVRWLIYRTPVYVSPRQTAAFRRLLRRCPARPGG 251

  Fly   276 ---APLGNNYRPPQ 286
               ||:.:|:||.|
Mosquito   252 DRFAPITSNFRPVQ 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CARPBNP_572581.1 alpha_CARP_X_XI_like 37..298 CDD:239395 77/274 (28%)
LOC1271844XP_061501997.1 None

Return to query results.
Submit another query.